|
Name : HPSA20_0236 (HPSA20_0236) Accession : YP_008471202.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Unknown Product : na+ symporter family protein Function : - COG functional category : - COG ID : - EC number : - Position : 220099 - 221757 bp Length : 1659 bp Strand : + Note : - DNA sequence : ATGGAAAATCATTCGCATGCTGATACGCATACAGATACGCACACCGATGATAAGATCACTAAGATCGTGCGCTTATTGGG GTTAGTAGGGGGGGTGTTAATCGCGCTTATTGTCTGTTACGCTCTTCATTCTCAAATGCCTCATATTGTAGAAGAAATCC CCAAACTTAACGCTTTAAATTATAAAGCGATGCCTGTTGTGGCGGGGGTGGCTATTTTAATGGGGATATGGTGGATGACA GAAGCCATTGACTTGCCCGCAACTGCGCTTTTACCTTTGGTGCTTTTTAGCGTCTTTAGCGTGGATCAATTCTCTAGCGT CAGCGCTTCTTACGCATCGCCCATTATTTTCCTTTTTATGGGAGGGTTTATTCTGGCTTTAAGCATGCAAAAATGGAATT TGCACACGCGCATCGCTTTAAGCATTATTTTATTGGTAGGCACAAGCCCTAGAAGGTTGATTTTAGGCTTTATGATCGCC ACAGGCTTTTTGTCCATGTGGGTGAGTAATACCGCAACGGCAGTGATGATGTTTCCTGTTGGCATGAGCGTGTTGCAATT AGTCGCTAAACTTGTGGGTAAAGAAAACGCTTCTAACCCAATTTTTAAAAAAGAAGAAATCACCAAAGCGCATGGGGGCA TTATGGGCAATATCGTGCATAAGGGCAAAGATATTACCCAAGTGATCCAAGAAAAAACCGTCATTTATCGCACGAATTTC AGTATTTGTTTGATGCTTGGCATCGCTTATTCCGCTTCCATTGGTTCTTTAGGGACTCTCATCGGCACGCCGCCTAACGC TTTATTGGCCGGCTATATGAAAACCGCTTTCAACATTGAAATTGATTTCGCTCAATGGATGGTGTTCGGGACGCCGTTAG CCTTTATCATGCTCATTTTAGCGTGGCTCTTGCTCACTTATGTGATTTTCCCTTTAAAGATTAAAGAAATCCCAGGGGGT AAGGAAGTCGTTAAGCTAGAGTTAAACAAATTAGGCCGTTTGAGTCAGGCGGAAATCTCAGTGGGGATTCTTTTTATCTT AGCGTCTTTAGGGTGGATTTTTTTAGATACGATTTTAAAATCTTGGGGCATTAAGATAGATAAGATTGATTCAGTGGTCG CTATGGGGGTTTCTGCGCTTTTATTCATTTTGCCGGCTAACAATCAGGGTGAAAGGCTCATTGAGTGGGACACTGCCAAA AAACTCCCTTGGGATGTGTTGCTTTTATTTGGCGGAGGGTTAGCGTTGAGCGCGCAATTTTCTAAAACCGGGTTGAGTTT ATGGATCGGGCATTTGGTTTCTGGCTTTTCGCATTTACCGATTTTATTCATTATTGTTTTGGTTACCTTAATGGTCATTT TCTTAACCGAAATCACTTCTAACACCGCCACCGCTGCAGCGTTTTTACCGGTGATTGGGGGGGTTGCGATGGGCATGGGC TATGAAAATCATCAAAGCTTGTTATTGACCATTCCTGTGGCTTTGAGCGCGACTTGCGCGTTCATGCTCCCTGTGGCCAC CCCACCCAATGCAATAGCTTATGGCTCTGGGTATGTTAAAATAACGGATATGATTAAAGCCGGTTTGTGGCTCAATCTGG TAGGAGTTGTTTTAATCAGCGCGTTTAGCTATGGTTTAGTTTCATTGATTTTTAATTGA Protein sequence : MENHSHADTHTDTHTDDKITKIVRLLGLVGGVLIALIVCYALHSQMPHIVEEIPKLNALNYKAMPVVAGVAILMGIWWMT EAIDLPATALLPLVLFSVFSVDQFSSVSASYASPIIFLFMGGFILALSMQKWNLHTRIALSIILLVGTSPRRLILGFMIA TGFLSMWVSNTATAVMMFPVGMSVLQLVAKLVGKENASNPIFKKEEITKAHGGIMGNIVHKGKDITQVIQEKTVIYRTNF SICLMLGIAYSASIGSLGTLIGTPPNALLAGYMKTAFNIEIDFAQWMVFGTPLAFIMLILAWLLLTYVIFPLKIKEIPGG KEVVKLELNKLGRLSQAEISVGILFILASLGWIFLDTILKSWGIKIDKIDSVVAMGVSALLFILPANNQGERLIEWDTAK KLPWDVLLLFGGGLALSAQFSKTGLSLWIGHLVSGFSHLPILFIIVLVTLMVIFLTEITSNTATAAAFLPVIGGVAMGMG YENHQSLLLTIPVALSATCAFMLPVATPPNAIAYGSGYVKITDMIKAGLWLNLVGVVLISAFSYGLVSLIFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0179 | NP_938571.1 | hypothetical protein | Not tested | Not named | Protein | 2e-99 | 52 |
