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Name : nifS (HPSA20_0243) Accession : YP_008471209.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Unknown Product : cysteine desulfurase, NifS family Function : - COG functional category : - COG ID : - EC number : 2.8.1.7 Position : 226267 - 227430 bp Length : 1164 bp Strand : + Note : - DNA sequence : TTGTTACAACGAATCTATTTAGACAATAACGCTACAACCAAGATTGACCCTAAAGTCAAAGAAATTATGGATCCTTTTTT AAGGGATCATTATGGGAATCCTAGCTCTTTGCACCAATTTGGCACCGAAACCCACCCAGCCATTGCAGAAGCTTTAGATA AGCTTTATAAGGGCATTAACGCCAGGGATATAGACGATGTGATCATCACTTCTTGCGCGACAGAAAGCAATAATTGGGTT TTAAAGGGCGTGTATTTTGATGAATGCTTGAAAAAAGGCAAAAATCATATTGTTACCACGGTTGCAGAGCATCCGGCGGT GCGATCCACTTGCAATTTTTTAGAAAGCTTGGGGGTAGAGGTTACTTACTTGCCTATTAATGAGCATGGGAGTATCACTG CAGAGCAAGTCAAAGAAGCGATCACAGACAAAACCGCTTTAGTGAGCGTGATGTGGGCGAATAATGAAACCGGTCTCATT TTCCCTATTGAAGAAATTGGGGCTATTTGTAAAGAAAAGGGCGTGTTATTCCATACTGATGCCGTGCAAGCGATTGGTAA AATCCCTGTAGATGTGTTAAAAGCGAATGCGGATTTCCTTTCTTTTAGCGCGCACAAGTTTCATGGGCCTAAAGGCGTTG GGGGGCTGTATATTAGAAGCGGGGTGGAATTGACCCCTCTTTTTCATGGAGGCGAGCATATGAATGGCAGGCGCAGCGGG ACTTTGAATGTGCCTTATATCGTGGGCATGGGCGAAGCGATGAGGTTAGCCGTAGAGCATTTAGACTATGAAAAAGAAGT GGTGGGGAAATTGCGCGACAAATTAGAAGAAGCGCTTTTGAAAATCCCTGATGTGATGGTGGTGGGCGATCGCATCCATC GTGTGCCTAACACGACTTTAATCAGCGTGAGAGGGATTGAAGGAGAGGCCATGCTGTGGGACTTAAACCGCTCTAATATC GCCGCTTCCACAGGAAGCGCGTGCGCGAGTGAGGATTTAGAGGCTAATCCGGTAATGGTAGCGATTGGGGCGAGTAAGGA GTTGGCTCATACCGCTATCAGGCTTTCATTGAGCCGTTTTAACACGGAAGCTGAAATTGACAAAACGATTGAAGTTTTCT CTCAAGCGGCTACAAGATTGAGAAACATTTCAAGCTCTTATTAA Protein sequence : MLQRIYLDNNATTKIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWV LKGVYFDECLKKGKNHIVTTVAEHPAVRSTCNFLESLGVEVTYLPINEHGSITAEQVKEAITDKTALVSVMWANNETGLI FPIEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANADFLSFSAHKFHGPKGVGGLYIRSGVELTPLFHGGEHMNGRRSG TLNVPYIVGMGEAMRLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRIHRVPNTTLISVRGIEGEAMLWDLNRSNI AASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAATRLRNISSSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 1e-49 | 41 |
