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Name : tkt (HPSA20_0397) Accession : YP_008471360.1 Strain : Helicobacter pylori SouthAfrica20 Genome accession: NC_022130 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 369976 - 371907 bp Length : 1932 bp Strand : - Note : - DNA sequence : ATGCAATTGAGTAACGCTGATTTAGAACGATTAAAAAGCATGGCCAACACGCTTCGCTTTTTATGCGCAGACATGATAGA TAAAGCCAATAGCGGGCATCCGGGCGTGTGCTTGGGGTTAGCCGATGTGATGGTGGTTTTAAGCTTGCATCTCAATCTCA ACCCCACTAACCCTAAATGGCTCAATAGGGACAGGTTGGTTTTTAGCGGAGGGCATGCGAGCGCGTTAGCTTATAGCTTG TTGCATTTGTGGGGCTTTGATTTGAGCTTAGAAGATTTAAAGCAGTTCAGGCAATTGCACTCTAAAACCCCAGGACACCC CGAATTGCACCACACCGAAGGCATTGAAATCACAACAGGCCCTTTGGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGTCAATACGCTCAAACCCTTTTGAATAAAGAAACGATCTCTCATAAAGTCTATTGCTTGTGCGGCGATGGGGAT TTGCAAGAAGGCATTAGCTATGAGAGCGCTTCTTTAGCCGGGCATCTTCGCCTTGATAACCTCATCGTGATTTATGATAG TAACCAAATCAGCATTGAAGGCGCTATTAATATTAGTTTTAGCGAACATGTTAAAACGCGCTTTTTAGCGCAAAATTGGG AAGTGCTAGAATGTAATGGGCATGACTATCAAGCCATTAATGACGCTTTAGAAACAGCCAAAAAAGCCACCAAACCCACG CTTTTAATCGCTCACACGATTATCGGCAAGGGGGCTATTGGCTTAGAGGGGAGTGAAAAAACGCATGGCTCGCCCTTGAA TAAAGAAGTGTTAAAACAATCCAAAGAAAACGCTTGCATCAATCCTAATGAAAGCTTTACAATTAGCCCCAAAAACAAAA TGCATTTTGAAGAAGTGAAAGTCAGGGGTATCAGTTTAGAAGCCTTATGGGAAAAATCCTTAAGCCCTAAAATAAAAGAA AAAATCCATGCGTTAAAAAATTTTGATTTTAATAGCATTCATTACCCCACCTTTAAACAAGGCGAATCTCTAGCCACTAG GGTGAGTAACGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAAGGCTTTTTAGGAGGGAGCGCGGATTTAGCCCCCT CTAATAACACTCATTTAAAACATTCTAGCGATTTCCCTTTAGGGCAGAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTTTTACCTTTTTGCGCGACCTTTTTTGTGTTCAGCGATTATTT AATGCCAAGCATGCGTTTGAGCGCTTTAATGCGATTAAAAGCCCTTTTTATTTTCACGCATGACAGCATTGGTGTGGGCG AAGACGGAGCGACGCACCAGCCCATAGAGCAATTGAGCCATTTACGCGCTTTGCCCAATTTCTATGCTTTCAGGCCAAGT GATGCTTTTGAAAATACCGCTTGCATGCAAGCAGCGCTCAATTTGAATGCCCCTAGCGCTTTTATTCTATCGCGCCAGAA TTTACCCGTGCTAGATGAAGTCTCTAAAGAACAGGTTTTAAAAGGGGCGTATGTTAAACACCCCTCTAAAGATCCTGTGA TCACGCTCGTTGCAAGCGGGAGTGAGGTCTCTTTAGCTTTAGAGAGCGCTAAAATTTTAGAGCGAGAAAATATCCAAACT CAAGTCATCAGCGCGCCATGCTTTGATTTGTTGATAGAGCAAGATGAAAACTATCTTAAAACGCTCTTTAAAGGTAAAGT CTTAGTGATTGAAGCGAGCCGTGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTTGCATGGATTCTTTTGGGAGTT CAGCAAAGGGCGATAAACTCTTTGAAAAATTTGGCTTTAGCGTTGAAAACATTACCAATCAAGCCAAAAGGTTACTCAAC GCATGCATTTAG Protein sequence : MQLSNADLERLKSMANTLRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNLNPTNPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLEDLKQFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQTLLNKETISHKVYCLCGDGD LQEGISYESASLAGHLRLDNLIVIYDSNQISIEGAINISFSEHVKTRFLAQNWEVLECNGHDYQAINDALETAKKATKPT LLIAHTIIGKGAIGLEGSEKTHGSPLNKEVLKQSKENACINPNESFTISPKNKMHFEEVKVRGISLEALWEKSLSPKIKE KIHALKNFDFNSIHYPTFKQGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTHLKHSSDFPLGQNLHFGIREHAM GAITNALAAYGLFLPFCATFFVFSDYLMPSMRLSALMRLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPNFYAFRPS DAFENTACMQAALNLNAPSAFILSRQNLPVLDEVSKEQVLKGAYVKHPSKDPVITLVASGSEVSLALESAKILERENIQT QVISAPCFDLLIEQDENYLKTLFKGKVLVIEASRAIEWYRFADKIICMDSFGSSAKGDKLFEKFGFSVENITNQAKRLLN ACI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-95 | 41 |
