Gene Information

Name : HMPREF0946_01798 (HMPREF0946_01798)
Accession : YP_008475717.1
Strain : Fusobacterium sp. 3_1_36A2
Genome accession: NC_022196
Putative virulence/resistance : Virulence
Product : acetaldehyde dehydrogenase (acetylating)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 72973 - 74421 bp
Length : 1449 bp
Strand : +
Note : -

DNA sequence :
ATGGATAGAGATTTATTATCAATCCAACAAGTAAGAGATTTAGTAAAGTCTGCTAAGATAGCACAAAAACTTTATTCAAC
TTTTACACAAGAACAAATAGATAGAGTAGTTTATGCAATAGTGCAAGAAATGAAAAATCACTATGTAGATTTAGCAAAAA
AGGCTAATGAAGAAACAGGTTTTGGAAAATGGGAAGATAAAGTAATAAAAAATAAATTTGCAAATGAATTTGTTTATAAT
TATATAAAAAATATGAAAACTGTTGGTATCTTAAATGAAACAGATACTGTAACAGAAGTAGGAGTACCTATGGGAATTGT
AGCAGCATTAACACCATCTACAAACCCAACTTCAACAGCAATTTATAAGACTTTAATTTCATTAAAAGCTGGAAATGCTG
TTATAGTAAGTCCTCACCCAAACGCAAAGAACTGTGTTATAGATACAGTTAAATTAATGCAAAAAGCAGCTGTTACAGCA
GGAGCACCGGAAGGATTGATAGGTGTTATTGAAATACCTACAATAGAAGGAACAAATGAATTAATGAGATCTAAGGATAC
TTCAATAATTCTTGCAACAGGTGGAGAAGCAATGGTAAGAGCAGCATATAGTTCGGGTAGACCAGCTATTGGAGTTGGAC
CTGGAAATGGACCTGCTTATATAGAAAAATCTGCAAATGTTAAAGAAGCAGTAAGAAAAATAATAGAAAGTAAAACTTTT
GACAATGGTGTAATCTGTGCTTCTGAACAATCAGTAATTGTTGAACCTTGTAATAAAGAAGCAGTAATGGATGAATTTAG
AAGACAAGGTGGTTTCTTCTTATCAAAAGAGGAAAGCGAAAAACTTGGAAGATTTATTTTAAGACCAAATGGAACTATGA
ATCCTCAAATAGTTGGTAAAGATGCACAAACTTTGGCTAAATTAGCAGGTTTAAATATACCATCAAATGTAAAGGTATTG
TTATCAGAACAAAATACAGTTTCTAAATCAAATCCATATTCAAGAGAAAAATTGACAACAATACTAGCTTTTTATGTTGA
AGAAAATGCAGAAAAGGCTTGTGAAAGAGCAATAGAATTACTTGAAAATGAAGGAGAAGGACATACTCTTATAATACACT
CTGAAAACAAAGATATTATAAGAGAGTTTGCATTAAGAAAACCTGTATCAAGATTACTTGTAAATGTAGGAGGTTCACTA
GGAGGAGTTGGAGCTACAACTAATTTAGCACCAGCATTTACACTAGGTTGTGGAGCTGTTGGAGGAAGTTCAACTTCTGA
TAATATCACTCCTATGAATTTAATAAATATTAGAAGAGTAGCTATTGGAGTTAGAGAATTATCAGATTTCAAAAAAGATG
TAAATATAGATACAAATTCTAATTCAGATATAACAAATTCTGAGGTAGAAGATATGATTAGAAGAATAATTGCAGAATAT
AGAAAATAA

Protein sequence :
MDRDLLSIQQVRDLVKSAKIAQKLYSTFTQEQIDRVVYAIVQEMKNHYVDLAKKANEETGFGKWEDKVIKNKFANEFVYN
YIKNMKTVGILNETDTVTEVGVPMGIVAALTPSTNPTSTAIYKTLISLKAGNAVIVSPHPNAKNCVIDTVKLMQKAAVTA
GAPEGLIGVIEIPTIEGTNELMRSKDTSIILATGGEAMVRAAYSSGRPAIGVGPGNGPAYIEKSANVKEAVRKIIESKTF
DNGVICASEQSVIVEPCNKEAVMDEFRRQGGFFLSKEESEKLGRFILRPNGTMNPQIVGKDAQTLAKLAGLNIPSNVKVL
LSEQNTVSKSNPYSREKLTTILAFYVEENAEKACERAIELLENEGEGHTLIIHSENKDIIREFALRKPVSRLLVNVGGSL
GGVGATTNLAPAFTLGCGAVGGSSTSDNITPMNLINIRRVAIGVRELSDFKKDVNIDTNSNSDITNSEVEDMIRRIIAEY
RK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42076.1 hypothetical protein Not tested PAI II 536 Protein 1e-116 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0946_01798 YP_008475717.1 acetaldehyde dehydrogenase (acetylating) VFG1595 Protein 9e-117 54