Gene Information

Name : SPUCDC_3738 (SPUCDC_3738)
Accession : YP_008483284.1
Strain : Salmonella enterica CDC1983-67
Genome accession: NC_022221
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein F1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3783146 - 3785077 bp
Length : 1932 bp
Strand : +
Note : -

DNA sequence :
ATGATGCCTGAATACGGCCACGCGCTGCTGTGCCTGGCGCTCGGCGTGGCGCTGCTGCTGTCCGTTTACCCGCTGTGGGG
CGTGGCGCGCGGTGACGCGCGGATGATGGCGTCGGCCGGGGTGTTCGCCTGGCTGCTGTTCATCTGCGTGGCGGGCGCGT
TTTTCGTGCTGGTGCACGCCTTTGTGGTTAACGACTTCACCGTGGCCTATGTCGCCGGCAACTCGAACACGCAGCTGCCG
GTGTGGTACCGGGTGGCCGCCACCTGGGGGGCGCACGAGGGCTCGCTGCTGCTGTGGGTGCTGCTGATGAGCGGCTGGAC
CCTGGCGGTGGCGGTGTTCAGCCGGCCGGTGCCGGCGGATATCGTCGCCCGGGTGCTGGCGGTGATGGGGATGGTCTGCG
CCGGTTTTCTGGCGTTCATCCTGTTCACCTCCGGCCCGTTCGTCCGCACGCTGCCGGCCTTTCCGGTGGAGGGGCGCGAC
CTGAACCCGCTGCTGCAGGACCCGGGGCTGATTTTCCACCCGCCGCTGCTGTACATGGGCTATGTCGGCTTCTCGGTGGC
CTTCGCCTTCGCCATCGCCGCGCTGCTGAGCGGGCGTCTGGACAGCGCGTTCACCCGTTTTGCCCGCCCGTGGACGCTGG
CGGCGTGGGTGTTCCTGACGCTGGGCATCGTGCTCGGCTCGGCGTGGGCCTACTACGAGCTGGGCTGGGGCGGCTGGTGG
TTCTGGGACCCGGTGGAGAACGCCTCCTTTATGCCGTGGCTGGCGGGCACCGCCCTGCTGCACTCGCTGGCGGTCACCGA
ACAGCGCGCCGGCTTTAAGGCGTGGACGCTGCTGCTGTCCATCTGCGCCTTCTCGCTGTGCCTGCTGGGCACCTTCCTGG
TGCGCTCCGGGGTGCTGGTGTCGGTGCACGCCTTCGCCTCCGACCCGGCGCGCGGAATGTTTATCCTCGCCTTTATGGTG
CTGGTCACCGGCGGCTCGCTGCTGCTGTTCGCCGTGCGCGGGCACAGGGTGCGTTCGCGGGTGAACAACGCGCTGTGGTC
GCGCGAGTCGCTGCTGCTCGGCAACAACGTCCTGCTGATGGCCGCCATGCTGGTGGTGCTGCTGGGTACCCTGCTGCCGC
TGGTGCACAAACAGCTGGGGCTGGGCAGCATTTCGGTGGGGGAGCCGTTCTTTAACACCATGTTCACCTGGCTGATGGTC
CCCTTTGCCCTGCTGCTGGGGGTGGGGCCGCTGGTGCGCTGGGGCCGGGACCGGCCACGTAACATCAGGAAACTGCTGTG
GGCTGCCGTTGTCACTACCCTGGTGCTGTCGGTACTTTTGCCGTGGCTGCTGGAAGATAAAATCATCGCCATGACGGCGG
TGGGGATGGCGATGGCCTGCTGGATTGCGGTGCTGGCGGTGGCCGAAGCCGTACAGCGCGTGTCCCGCGGCACGAAAACC
TCTCTCAGCTACTGGGGAATGGTGGCGGCGCACCTCGGGCTGGCGGTGACGATTACCGGCATCGCCTTCAGCCAGAATTA
CAGCGTGGAGCGTGACGTGCGGATGCGGGCGGGCGACAGCGTGACCATTCACGACTACCGCTTCACCTTCCGGGAGGTGC
GGGACATCACCGGGCCCAACTACCGCGGCGGGGTGGCCCTCATCGGGGTGACGCGCCACGGCGAGCCGGAGGCGGTGCTG
CACGCGGAGAAACGGCTCTACAACACCAGCCGGATGGTGATGACCGAGGCGGCGATTGACGGCGGGCTGACCCGCGATCT
GTACGCCGCGCTCGGGGAGGAGCTGGACAACGGCGCGTGGGCTGTGCGCCTGTACTACAAACCGTTTGTCCGCTGGATAT
GGGCCGGGGGGCTGCTGATGGCGCTGGGCGGGCTGCTGTGCCTGGTGGACCCGCGCTACCGCCGCCGTAAACCATTGCCG
GAGGCCGGATGA

Protein sequence :
MMPEYGHALLCLALGVALLLSVYPLWGVARGDARMMASAGVFAWLLFICVAGAFFVLVHAFVVNDFTVAYVAGNSNTQLP
VWYRVAATWGAHEGSLLLWVLLMSGWTLAVAVFSRPVPADIVARVLAVMGMVCAGFLAFILFTSGPFVRTLPAFPVEGRD
LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIAALLSGRLDSAFTRFARPWTLAAWVFLTLGIVLGSAWAYYELGWGGWW
FWDPVENASFMPWLAGTALLHSLAVTEQRAGFKAWTLLLSICAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMV
LVTGGSLLLFAVRGHRVRSRVNNALWSRESLLLGNNVLLMAAMLVVLLGTLLPLVHKQLGLGSISVGEPFFNTMFTWLMV
PFALLLGVGPLVRWGRDRPRNIRKLLWAAVVTTLVLSVLLPWLLEDKIIAMTAVGMAMACWIAVLAVAEAVQRVSRGTKT
SLSYWGMVAAHLGLAVTITGIAFSQNYSVERDVRMRAGDSVTIHDYRFTFREVRDITGPNYRGGVALIGVTRHGEPEAVL
HAEKRLYNTSRMVMTEAAIDGGLTRDLYAALGEELDNGAWAVRLYYKPFVRWIWAGGLLMALGGLLCLVDPRYRRRKPLP
EAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 0.0 99
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 4e-121 55