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Name : secD (N175_11750) Accession : YP_008488754.1 Strain : Genome accession: NC_022223 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2497846 - 2499702 bp Length : 1857 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : GTGCTAAACCGTTATCCGTTATGGAAGTATTTGTTAGTGGTGTTCGCCATCACTCTCTCTGCTTTATATGCACTTCCAAA TATTTACGGTGAAGATCCGGCAATTCAAATTACAGGGGCGCGTGGCGCCTCTGTTGATATGTCAACGCTGGATGCTGTCA CCAAAGCTCTTGATAAAGAGAGCCTTTCTCATAAATCCATTGCTCTAGAGAATGGATCAATTCTTGTTCGATTTAACGAT ACCGATACTCAAATCAGTGCGCGTGATGTGGTGAGTGAAGCGTTAGGCAAAGATACAATTGTTGCACTTAACCTTGCTCC TTCAACGCCTTCTTGGTTGGAATCGATTGGCGCGGCACCGATGAAGCTTGGCCTTGATCTGCGTGGTGGTGTTCACTTCT TAATGGAAGTGGATATGGATGCCGCAATGGAAAAATTGATTGGCCAGCAAGAAGAAGCGTTTCGCAGCGAACTGCGTGAT GAAAAAATTCGCTACCGCGCCATTCGCTCAGTGGGCAACGACCGAGTGGAAGTCACTTTGCGTGACGATGAGCAATTAGA GCAAGCACAGCAAGCATTAACGTCGAAACATCCTGATATGACTTTTACTACGTCTAAGGCTGACGGTCGCTTTGCGCTGA TTGCTCAATTTACTGAGCAGCGTTTGCAGGAAGTTCGAAATTACGCCGTTGAGCAGAACATCACGATTTTGCGTAACCGT GTTAACGAATTAGGGGTCGCTGAACCCTTAGTGCAGCGTCAAGGTGCCAGCCGCATTGTGGTTGAGTTACCGGGGGTTCA AGATACTGCTCGTGCTAAAGAGATTCTTGGCGCAACCGCGACTCTTGAGTTTCGTGAAGTTGATGACAAGGCTGATTTAG CCGCCGCGGCTTCTGGTCGTGCTCCTGCTGGGAGTGAAATCAAATCTGATCGTAATGGTCGCCCGGTTGTCTTGAAAAAA CGCGTGATTCTAGGTGGTCAAAGTATCACGGATGCCAGCTCTAGCATGGATGAATATGGTCGCCCGCAAGTGAACATTTC GTTAGATAGCGAAGGCGGAAATAAGATGTCGGCGTTCTCTAAAAAGAACATTGGCAAGCTTATGGCAACGGTATTTGCAG AGTACAAAGACAGCGGCCGTCGGACACCTGATGGCAAAGTGATTCTGGATAAGCATGAAGAAGTGATCAACCAAGCAACG ATTCAGTCGGCTCTTGGGCGTAACTTCCGTATCACGGGAATTGATTCTGCTGCAGAAGCTCAAAACCTTGCACTTTTACT GCGTGCAGGTGCGTTAATTGCGCCAATCTCTATTGTTGAAGAGCGTACCATTGGTCCATCAATGGGGCAGCAAAATATCG ATATGGGCATTCAAGCCTGTATCTGGGGTATGGTTGCGGTGATGCTCTTTACGCTGCTTTACTACCGTGGTTTTGGCTTG ATTGCCAATATTGCATTGATGGCGAACCTTGTGCTCATTATTGGTGTGATGTCGATGATCCCAGGGGCGACAATGACCTT GCCGGGTATTGCGGGCATCGTATTGACGGTCGGTATGGCCGTGGATGCTAACGTTCTGATCTTCGAGCGTATTCGTGAAG AGCTCCGTGATGGACGAAACCCACAACAAGCTATCCACCAAGGCTATGCTAACGCGTTCAGTACCATTGCTGATGCCAAC ATCACTACGTTGATTACGGCAATCATTTTATTTGCTGTGGGTACTGGAGCCATCAAAGGGTTTGCCGTCACACTTTCTAT CGGTATTTTAACCTCAATGTTTACCGCTATTATCGGGACTCGCTGTATTGTGAACCTGTTATATGGTGGTAAACGCATTA AAAAATTGTCGATCTAA Protein sequence : MLNRYPLWKYLLVVFAITLSALYALPNIYGEDPAIQITGARGASVDMSTLDAVTKALDKESLSHKSIALENGSILVRFND TDTQISARDVVSEALGKDTIVALNLAPSTPSWLESIGAAPMKLGLDLRGGVHFLMEVDMDAAMEKLIGQQEEAFRSELRD EKIRYRAIRSVGNDRVEVTLRDDEQLEQAQQALTSKHPDMTFTTSKADGRFALIAQFTEQRLQEVRNYAVEQNITILRNR VNELGVAEPLVQRQGASRIVVELPGVQDTARAKEILGATATLEFREVDDKADLAAAASGRAPAGSEIKSDRNGRPVVLKK RVILGGQSITDASSSMDEYGRPQVNISLDSEGGNKMSAFSKKNIGKLMATVFAEYKDSGRRTPDGKVILDKHEEVINQAT IQSALGRNFRITGIDSAAEAQNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGIQACIWGMVAVMLFTLLYYRGFGL IANIALMANLVLIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREELRDGRNPQQAIHQGYANAFSTIADAN ITTLITAIILFAVGTGAIKGFAVTLSIGILTSMFTAIIGTRCIVNLLYGGKRIKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-121 | 50 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-121 | 50 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-121 | 50 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 9e-122 | 50 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-122 | 50 |
