|
Name : N175_17415 (N175_17415) Accession : YP_008489790.1 Strain : Genome accession: NC_022224 Putative virulence/resistance : Unknown Product : type IV secretion protein Rhs Function : - COG functional category : - COG ID : - EC number : - Position : 631561 - 633645 bp Length : 2085 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : GTGTTATTTTGCGATAAAAGAGTGGAAGGGAAAAAGATGGCAAGGTTAAGTTTTAGGCTCACCGTGGAGGGTTTGGCAGA CGACACGTTAGTGGTGCATGAATACCAAGGTGTGGAATCGCTGTCTGATAGCACGCAAGCGGGCCTGCGCTGCTACGGTT TTCGCTATGAGATAAAACTGGCCAGTCGTCAATCTGGCTTAACGGCACTGGAGCTGGTGGACAAAACCGCTCAGCTTGAG ATACTGCGTGATGACCTTGTCGTGCAGCGCGTGCACGGCATTGTGCGCCAGTTCAGTAAAGGCGATATTGGCCATCATCA CACCTTTTACTCACTGACCTTAGTCCCGGCATTAGAGCGGTTATCACTGCGCCAAAACAGCCGCATCTTCCAGCTCAAAA CCGTTCCCGAAATCCTCTCCATCGTACTGCAAGAAATGGGCATTAACGACTACGCCTTCTCGCTGAAGCGCGAGTGTGCA CAGCGTGAATTCTGCGTGCAGTACCGTGAGACGGATATCGACTTCTTGCACCGCTTAGCCGCCGAAGAAGGCTTGGTGTA TCACTTCATTCATGAAGAGGGGAAACACACCCTCTTTTTCAGTGACGACAGCCAAAGCCTGACGAAGCGAGAAACGCCTA TCCCTTACAACGTCCTTGCGGGTGGCGTGATGGAGAGCCCTTATGTGTCGCAATTAACGCAACACAGCCAAACCGAAGTG AGCCACAGCGCGCTGCAAGATTACAGCTTTAAAAAGCCGAGCTACTCGTTTGCCCAGCAAGCGCAAGGGCGCGAAATGGA TTACCAGCAAGCGACCTACGAGCACTTTGATGCACCGGGTCGCTTTAAAGACGACATCAGCGGCAAAGCCTTTAATCAAA TTCGCTTAGAGTACTTACGACGAGAAGCGCGTACCGCGACCGGAAAAAGTAACCATCCGGGCCTGCAAGCGGGCACAAAG TTCGACTTACAAGAGCATCTTGACGACAGCGCGAACCGCGATTGGGTTGTCGTGCAAGTGCATCATCAGGGGCAGCAGCC ACAAGCATTGGAAGAAGAGGGCGGCAGTGGCGCGACCACGTACAGCAACCAATTCACGCTCATTCCTGCTGATGTCACGT GGCGTGCGACACCGCAAGCCAAACCTCAAGTGGATGGCCCTTGCATGGCATTGGTGGTGGGGCCTGATGGCGAAGAAATC TTCTGTGACGAACATGGCCGCGTCAAACTGCATTTCCCGTGGGACAGATATTCCAACGGCGATGAACACAGCTCATGCTG GGTGCGCGTCTCACAAGGTTGGGCTGGCAGCCAATATGGCATGATAGCCATTCCGCGCATTGGTCATGAAGTCATCGTCT CGTTTCTTAACGGCGACCCAGACCAACCGATAGTGACAGGCCGTACCTACCATGCGACCAATAAAGCGCCGTACGCACTG CCGGATAACAAAACCAAAACCGTGCTGCGCAGTGAAACGCACCAAGGAGAAGGGTTTAACGAGCTGAGTTTTGAAGACCA AGCAGCGCAAGAGAAAATCTACCTACACGCGCAAAAAGACTTAGACGCCTTGGTGCTCAATGACGCCACGGCGCACATCA AGCACGACCAGCACCTCACGGTGGATAACGACCAATTCACGCACGTTAAACATAACCAGCACCTCACGGTGGAGGGCGAA AGCCGCGAATCGGTTAAGGGTAGCTGTATATTAATGGTCGATGGTTCCTTGCACGTAAAATCAGGGCAAGTTTGGACTAA TGAAAGTGGAGATGAAATCCACATCAAAGCTGGACAAAAAGTGGTGATTGAAGCAGGGTCAGAAATTACCGTGACAGCCG GTGGCAGTTTTGTCAAAGTCGATCCTGCTGGTGTCCATCTTTCTGGGGCGGGCGTTAATTTAAACTCAGGCGGAAGTGCG GGCAGTGGCAGTGGTTTTAGTGGCGATTTACCGTTATTACCTGGTGAGCTTGAACTGCAAAAATCCCCCGCGCCACCTCA AACCATTCTTTACCAAGCGCTATTGCAAGCTGAAGAAGCACGAGTGCCAGCCGTAAAAGTATGCCCATTAGCCGGGGATG CCTAA Protein sequence : MLFCDKRVEGKKMARLSFRLTVEGLADDTLVVHEYQGVESLSDSTQAGLRCYGFRYEIKLASRQSGLTALELVDKTAQLE ILRDDLVVQRVHGIVRQFSKGDIGHHHTFYSLTLVPALERLSLRQNSRIFQLKTVPEILSIVLQEMGINDYAFSLKRECA QREFCVQYRETDIDFLHRLAAEEGLVYHFIHEEGKHTLFFSDDSQSLTKRETPIPYNVLAGGVMESPYVSQLTQHSQTEV SHSALQDYSFKKPSYSFAQQAQGREMDYQQATYEHFDAPGRFKDDISGKAFNQIRLEYLRREARTATGKSNHPGLQAGTK FDLQEHLDDSANRDWVVVQVHHQGQQPQALEEEGGSGATTYSNQFTLIPADVTWRATPQAKPQVDGPCMALVVGPDGEEI FCDEHGRVKLHFPWDRYSNGDEHSSCWVRVSQGWAGSQYGMIAIPRIGHEVIVSFLNGDPDQPIVTGRTYHATNKAPYAL PDNKTKTVLRSETHQGEGFNELSFEDQAAQEKIYLHAQKDLDALVLNDATAHIKHDQHLTVDNDQFTHVKHNQHLTVEGE SRESVKGSCILMVDGSLHVKSGQVWTNESGDEIHIKAGQKVVIEAGSEITVTAGGSFVKVDPAGVHLSGAGVNLNSGGSA GSGSGFSGDLPLLPGELELQKSPAPPQTILYQALLQAEEARVPAVKVCPLAGDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 3e-121 | 43 |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 1e-96 | 42 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 1e-96 | 42 |
