Gene Information

Name : SBOV10091 (BN855_10500)
Accession : YP_008504882.1
Strain : Salmonella enterica 3114
Genome accession: NC_022241
Putative virulence/resistance : Virulence
Product : transcriptional activator protein IrlR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1085470 - 1086150 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGATTTTATTGATTGAAGATAACCAGAAAACCATTGAGTGGGTACGTCAGGGACTCACGGAAGCAGGCTATGTGGT
TGATTATGCCTGTGATGGACGAGACGGATTACACCTGGCCCTTCAGGAACATTATTCATTGATTATTCTTGATATTATGC
TGCCGGGGCTTGATGGATGGCAGGTTTTACGCGCGTTACGCACTGCGCATCAGTCCCCTGTTATTTGCCTGACGGCGCGC
GACTCGGTTGAGGATCGCGTCAAAGGTCTTGAGGCGGGCGCTAATGATTACCTTGTTAAGCCTTTTTCCTTCGCCGAACT
GCTGGCCCGGGTGAGAGCTCAACTCAGACAGCATGTCCCGGTCTTTACCCGACTGACGATTAATGGTCTGGACATGGATG
CCACAAAGCAATCGGTGTCACGAAATGGCAAACCGATTTCCCTGACCCGCAAAGAATTCCTGCTCCTCTGGTTACTGGCG
TCCCGGGCAGGAGAAATCGTGCCCCGAACCGCGATTGCCAGCGAAGTTTGGGGAATTAACTTTGATAGTGAAACCAACAC
CGTTGATGTCGCGATTCGTCGGCTGCGCGCCAAAGTAGACGATCCATTTGAAAATAAGCTCATTATGACCGTCCGGGGGA
TGGGTTATCGATTACAGGCGGAAGCGTCGCAGAATGGTTAA

Protein sequence : 
MKILLIEDNQKTIEWVRQGLTEAGYVVDYACDGRDGLHLALQEHYSLIILDIMLPGLDGWQVLRALRTAHQSPVICLTAR
DSVEDRVKGLEAGANDYLVKPFSFAELLARVRAQLRQHVPVFTRLTINGLDMDATKQSVSRNGKPISLTRKEFLLLWLLA
SRAGEIVPRTAIASEVWGINFDSETNTVDVAIRRLRAKVDDPFENKLIMTVRGMGYRLQAEASQNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-102 99
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-102 98

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR BAC0083 Protein 3e-56 58
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR BAC0197 Protein 2e-59 58
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR BAC0125 Protein 1e-59 56
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR BAC0638 Protein 1e-52 56
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR BAC0308 Protein 3e-54 55
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR BAC0111 Protein 4e-57 53
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR BAC0347 Protein 2e-50 51
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR NC_007622.3794948.p0 Protein 1e-39 45
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR NC_003923.1003417.p0 Protein 1e-39 45
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR NC_013450.8614146.p0 Protein 1e-39 45
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR NC_002951.3238224.p0 Protein 1e-39 45
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR NC_007793.3914065.p0 Protein 1e-39 45
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR NC_002758.1121390.p0 Protein 1e-39 45
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR NC_010079.5776364.p0 Protein 1e-39 45
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR NC_002952.2859858.p0 Protein 1e-39 45
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR AE015929.1.gene1106. Protein 2e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR VFG0596 Protein 4e-103 99
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR VFG1389 Protein 4e-32 42
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR VFG0473 Protein 4e-29 41
SBOV10091 YP_008504882.1 transcriptional activator protein IrlR VFG1390 Protein 5e-38 41