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Name : VAPA_1c02360 (VAPA_1c02360) Accession : YP_008514039.1 Strain : Genome accession: NC_022247 Putative virulence/resistance : Virulence Product : type VI secretion system Vgr family protein Function : - COG functional category : - COG ID : - EC number : - Position : 246754 - 249138 bp Length : 2385 bp Strand : + Note : - DNA sequence : ATGCCCAACAGAGTCGTCAAAGCCCACACGCCGCTGGGAGAAGACCAGCTTCTGTTCCGCTCGATGCACGGCACCGAGGG GTTGTCGCAGCTGTTCGAGTTCGAGGTCGACCTGTTGAGCCCGAGCGTGTCGCTCGACATGAAGTCGGTGCTGGGCAAGC CGCTCTCGCTCGAGATACAGACGGCGGGCGAACCTCGTTTCCTGAATGGGCAGATCGTTCGCTTCACGATGGTCGGCAAG GAAGGGGGCTCGTCGCGCTACGTGCTGTACCGCGCCACTGTGCGGCCCTGGCTCTGGTATCTGACGCGCACCAGCGACTG CAAGATCTTCCAGAACAAGTCGGTCGTCGACATCCTCCAGGAAGTGTTCGCCGACTACAACTTCGCGTTCGAGAAGAAGC TCAGCGGAACCTACCGCCAGTGGGAGTACTGCGTGCAGTACCAGGAGACCGACTTCGCCTTCGTGAGCCGGTTGATGGAG CATGAAGGCATCTACTACTACTTCAAGCACGAGAAGGGCGAGCACACGCTGGTGCTTGCCGACGACATCGGCGCCCACGA AACCCTGCCGGGCTATCCGAAGATCAGCTATCTTGCGGCCGACCGCAACCCGGACCCGTTCCAGGAGGTAATCGACCAGT GGCAGGTGACCGAGGAAATCCGCCCCGGCACCTATGTGGTGGACGACTACGATTTCAAGAAGTCGAAGGCCGACCTCATG GGCATGCGCAGCCAGCCGCGCGGGAATCCTCACGACACCTACGAGATCTACGAATGGCTGGGCGGCTTCAGCGAGGCCGA GCAGGGCGAGCACTACTCGCGCATCCGGCTCGAAGAGGCGCAATCGCAGGCCGAGCGCGACGTCGGCCACTCCAGCGTGC GTGGCATGGCGCCGGGCTACCGCTTCACGATGCAGAACTGCCCGCGGCAGGACGACAACCGCGAATACCTGATCGTGTCG GTGTCCTATGCGCTGCGCGAAGGCGGGTATGAGAGCGGTGCGGCCGAAAGCCACTACAGCTTCAGCTTCGCGGTGCAGCC GACCTCGTACGCATTCCGTCCGCCGCGCGTCACGCCGATGACCCGGACCAACGGGCCGCAGACCGCGACGGTGGTGGGCA GGGCAGGCCAGGAGTACTGGGTCGACCAATACGGCCGCGTGAAGGTGCAGTTCCGCTGGGACCGCTACGGCAAGAGCGAC GAGAACAGCTCATGCTGGGTGCGCGTTTCCAGCGCCTGGGCCGGCTCGAACTACGGCGCCGTCAATCATCCGCGCAAGGG CCAGGAAGTGATCGTCGATTTCATCGGCGGCCATCCCGACCGGCCCATCATCATCGGCCGCGTCTACAACTCCGACCAGA TGCCGCCGCTGGAACTGCCCGCGAAGGTTACCGTGAGCGGCTTCGTGAGCCGCAGCCAGGACGGCACGCCGGCGAATGCC AACGAGTTCATTCTGGACGATGCGCCGGGCTGCGAACTGGTCCGGATTCATGCCGAGAAGGATTTCGAGCTCGATGTGGA AGCGGACGAGCGCGACACCATCGCCGGCGATCGCACCACGGTGATCGAGGGCGCCGACGACTACACCACCAACACCTCGC TCACCGAGACGATCAACGGCCCGCATACCGTGACGGTCAACGAGGGGGGACCGCAGAACATCACCGTCAATGGCGGTCCG CAGAACGTCAAGATCAAAGGTGGCAACCAAGATGTCTACGTCGATGGCGACCAGATCATTCACGTGACCGGCAGTCGCAC AGACACGGTGGACAGCGGCGAGACCCGGACGATAACTGGTGGTTTGACCGAAGATATAACGGGACGTCAGAAAACGACGA TTTCCGCAGCATATGAAGAAACCTCAGGAACCAAGAATGTTTCGGTCAGCAAGGGAAACGAAAACTATTGGGTGAGTGGA GACAGCGTTCGGATTGTTGGAGGCGCGTCAAATCTGTATTCGGTCGGGACGGTTCAGGTCGACACCGTCGGCGGCATAAA TCTCTTTGCGAACTCAGGCGACGTCAACATAACGACGCCGGATCAGTTCAACGTGCACGCGAACGTCATCAGCCTGACTT CGGACCACAAGGACATCAGTTACACGAATTCGCTGAAGACCCATGCCGGCAGCACGATCACCACCATCGCGGACCTGTCC ATCACGTCGATGACGCCGTTTGCAAATTCGCTGGCTTGGGCGAATTCATTTACCTTCGCACCGCTGTCGGAGACCGTCAA CGCGGCGAGCACCAACATCGGCGGCGCCAGTGCCGACATCAAAGCCTTCCGCTGGTCGAACCGAGCTTTCAACCAAAAAC AGGAATCCCAGGTCTCGATCGGTCCAATCTACGTGGACATCAAGATTCTGGTGCTCTTTCCGTGA Protein sequence : MPNRVVKAHTPLGEDQLLFRSMHGTEGLSQLFEFEVDLLSPSVSLDMKSVLGKPLSLEIQTAGEPRFLNGQIVRFTMVGK EGGSSRYVLYRATVRPWLWYLTRTSDCKIFQNKSVVDILQEVFADYNFAFEKKLSGTYRQWEYCVQYQETDFAFVSRLME HEGIYYYFKHEKGEHTLVLADDIGAHETLPGYPKISYLAADRNPDPFQEVIDQWQVTEEIRPGTYVVDDYDFKKSKADLM GMRSQPRGNPHDTYEIYEWLGGFSEAEQGEHYSRIRLEEAQSQAERDVGHSSVRGMAPGYRFTMQNCPRQDDNREYLIVS VSYALREGGYESGAAESHYSFSFAVQPTSYAFRPPRVTPMTRTNGPQTATVVGRAGQEYWVDQYGRVKVQFRWDRYGKSD ENSSCWVRVSSAWAGSNYGAVNHPRKGQEVIVDFIGGHPDRPIIIGRVYNSDQMPPLELPAKVTVSGFVSRSQDGTPANA NEFILDDAPGCELVRIHAEKDFELDVEADERDTIAGDRTTVIEGADDYTTNTSLTETINGPHTVTVNEGGPQNITVNGGP QNVKIKGGNQDVYVDGDQIIHVTGSRTDTVDSGETRTITGGLTEDITGRQKTTISAAYEETSGTKNVSVSKGNENYWVSG DSVRIVGGASNLYSVGTVQVDTVGGINLFANSGDVNITTPDQFNVHANVISLTSDHKDISYTNSLKTHAGSTITTIADLS ITSMTPFANSLAWANSFTFAPLSETVNAASTNIGGASADIKAFRWSNRAFNQKQESQVSIGPIYVDIKILVLFP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0319 | NP_454896.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 6e-104 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VAPA_1c02360 | YP_008514039.1 | type VI secretion system Vgr family protein | VFG2077 | Protein | 2e-118 | 43 |
