|
Name : glcD (VAPA_1c02800) Accession : YP_008514083.1 Strain : Genome accession: NC_022247 Putative virulence/resistance : Unknown Product : glycolate oxidase, subunit GlcD Function : - COG functional category : - COG ID : - EC number : - Position : 300216 - 301718 bp Length : 1503 bp Strand : + Note : - DNA sequence : ATGAACGCGCCGCTCACCGCCGTCCAGCACGATTCGCTGCAGAAAACCGACCGCCAGTCGCAGATCGTGCGCGCCCTGCA GGCCCACCTGCCGGCGCACGCGCTCATCTGGCATGCCGAGGACACCACGCCCTACGAGTGCGACGGCCTCACCGCCTACC GGCAGCGTCCGCTGGTGGTGGCCCTGCCCGAGACCGAGGCGCAGGTGGCGGCGGTGCTCAAGACCTGCCACCAGCTCGGC GTGCCCGTGGTGGCGCGCGGCGCGGGCACCGGGCTCTCGGGCGGCGCCATGCCGCATGCGCTGGGCGTGACGCTGTCGCT CGCCAAGTTCAACCGCATCCTGAAGATCGACCCGGTGAGCCGCACGGCCGTGGTGGAGTGCGGCGTGCGCAACCTCGCCA TCAGCGAAGCCGCCGCGCCTTTCAATCTCTACTACGCGCCCGATCCGTCGAGCCAGATCGCCTGCACCATCGGCGGCAAC GTGGCCGAGAACTCGGGCGGTGTGCACTGCCTGAAATACGGCCTCACGCTGCACAACGTGCTGCGCGTGCGCGGCTTCAC GGCGGAAGGCGAGCCCGTCGAGTTCGGCGGCGAGGCGCTCGACGCGCCGGGCCTGGACCTGCTCGCGCTGGTCATCGGCA GCGAAGGCATGCTGGCCGTGACCACCGAGGTCACCGTCAAGCTGGTGCCCAAGCCGCAGCTCGCACGCTGCATCATGGCC AGCTTCGACGACGTGCGCAAAGCCGGCGATGCGGTGGCCGCGGTGATTGCGGCCGGCATCATCCCCGCGGGGCTCGAGAT GATGGACAAGCCGATGACCGCCGCCGTCGAAGACTTCGTGCATGCGGGCTACGACCTCGAAGCCGCCGCCATTCTTCTGT GCGAATCCGACGGCACCGCCGAAGAGGTGGAAGAGGAAATCGGCCGCATGACGGCCGTGCTGCGCTCCTCCGGCGCCACC GCCATCGCGGTCAGCACCAGCGAAGACGAACGCATGAAGTTCTGGAGCGGCCGCAAGAACGCGTTCCCGGCGTCGGGCCG CATCAGCCCCGACTACATGTGCCTCGATTCGACCATTCCGCGCAAGCGGCTGGCCGACATCCTGCTGGCCATCCAGCAGA TGGAGAAGAAGTACAACCTGCGCTGCTGCAACGTGTTCCACGCGGGCGACGGCAACCTGCATCCGCTGGTGCTGTTCGAT GCCAACGACCCCGACGAGCTGCACCGCTGCGAGCTCTTCGGCGCCGACATCCTCGAGACCAGCGTGGCCATGGGCGGCAC CGTGTCGGGCGAGCATGGCGTGGGCGTGGAAAAGCTCAACAGCATGTGCGTGCAGTTCACCGCGGCCGAGAACGAGCAGA TGTTCGGCGTCAAGCGGGCCTTCGATCCGGCGGGGCTGCTGAACCCCGGCAAGGCGATTCCCACGCTGCAGCGCTGTGCC GAATACGGCAAGCAGGTGGTGCGCGGCGGCAGGCTGCCGCATCCCGACCTGCCGCGCTTCTGA Protein sequence : MNAPLTAVQHDSLQKTDRQSQIVRALQAHLPAHALIWHAEDTTPYECDGLTAYRQRPLVVALPETEAQVAAVLKTCHQLG VPVVARGAGTGLSGGAMPHALGVTLSLAKFNRILKIDPVSRTAVVECGVRNLAISEAAAPFNLYYAPDPSSQIACTIGGN VAENSGGVHCLKYGLTLHNVLRVRGFTAEGEPVEFGGEALDAPGLDLLALVIGSEGMLAVTTEVTVKLVPKPQLARCIMA SFDDVRKAGDAVAAVIAAGIIPAGLEMMDKPMTAAVEDFVHAGYDLEAAAILLCESDGTAEEVEEEIGRMTAVLRSSGAT AIAVSTSEDERMKFWSGRKNAFPASGRISPDYMCLDSTIPRKRLADILLAIQQMEKKYNLRCCNVFHAGDGNLHPLVLFD ANDPDELHRCELFGADILETSVAMGGTVSGEHGVGVEKLNSMCVQFTAAENEQMFGVKRAFDPAGLLNPGKAIPTLQRCA EYGKQVVRGGRLPHPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 2e-131 | 60 |
