Gene Information

Name : VAPA_1c40830 (VAPA_1c40830)
Accession : YP_008517833.1
Strain :
Genome accession: NC_022247
Putative virulence/resistance : Virulence
Product : putative two component transcriptional regulator, LuxR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4347467 - 4348081 bp
Length : 615 bp
Strand : +
Note : -

DNA sequence : 
GTGACCGCCCTTGCCAACCACCTGTGCATCGTCGACGACGACGAGGCCGTGCGCCGCTCGCTGGGCCTCCTGCTGCTGTC
GCGCGGCCATGCGGTGCAGACCTTTGCCTCGGGCGAGGCCTTCCTGGCCGGCGCCGACCTGCAGCGCCCGGGCTGCGTCG
TGCTGGACCTGCGCATGGAGGGCATGAGCGGGCTGCAGGTGTTCGATGCGCTGCGTGCGCAGGACAGCCCGCTGGTGGTG
ATCTTCCTGTCCGGCCACGGCGACATTCCGATGGCGGTCGAGGCGGTGCAGAACGGCGCCTTCGGCTGGCTCGAGAAGCC
CTGCAACGACGAACGCCTGCTCGAGAGCATTGCCAAGGCGCTGCAGAAGGCCGAGGAGATCGCCGTGCGCCGGCAGGCCC
GCCAGGCCGCGCAGGCCCTGTGGTCCAAACTGACGCCGCGCGAGATGCAGGTGGCCCGGCTGGTCGCCCAGGGCCTGCCC
AACAAGCGCATCGCGCTGGAGCTCGCGCCGCTGGAGCAGCGCACGGTGGAAACGCACCGCGCCCACGTGTTCGCCAAGCT
CGGCCTGTCGAACAGCCACGAGCTCGACCGGTTCCTGCGCGAGCACGCGTTGTAG

Protein sequence : 
MTALANHLCIVDDDEAVRRSLGLLLLSRGHAVQTFASGEAFLAGADLQRPGCVVLDLRMEGMSGLQVFDALRAQDSPLVV
IFLSGHGDIPMAVEAVQNGAFGWLEKPCNDERLLESIAKALQKAEEIAVRRQARQAAQALWSKLTPREMQVARLVAQGLP
NKRIALELAPLEQRTVETHRAHVFAKLGLSNSHELDRFLREHAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-18 42
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-18 42
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-18 42
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 1e-18 42
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-18 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAPA_1c40830 YP_008517833.1 putative two component transcriptional regulator, LuxR family VFG0488 Protein 6e-19 42