Gene Information

Name : VAPA_1c53380 (VAPA_1c53380)
Accession : YP_008519063.1
Strain :
Genome accession: NC_022247
Putative virulence/resistance : Unknown
Product : putative tartrate transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5606275 - 5607597 bp
Length : 1323 bp
Strand : -
Note : -

DNA sequence :
ATGACTTCCTCCACCCTTCCGGCGGGCGCAATGCCCGTGTCCGCCGATGCCGCGCTCGAGAAGCGCGCCTACGCCAAGGT
GTTCTGGCGCCTCGTTCCCTTCCTGATGCTGTGCTATGTGGTCGCCTACCTCGACCGCGTGAACGTGGGCTTTGCCAAGC
TCCAGATGGGACAGGACCTGGGCTTCAGCGAAACGGTGTTCGGCCTGGGCGCGGGCATCTTCTTCCTGGGCTACTTCCTG
TTCGAGGTGCCGAGCAACCTGCTGCTCAGCCGCGTGGGCGCACGCATCTGGATTGCGCGGATCATGATCACCTGGGGCTT
GCTGTCGGCATGCTTCGTGTTCGTGGAAACGCCGACCAGCTTCTACATCCTGCGCTTTTTGCTCGGCGTGGCGGAAGCGG
GCTTCTATCCCGGCGTGATCCTGTACCTCACCCACTGGTATCCGGCGCACCGGCGCGCGCGCATCATCGCGGTCTTCATG
TCGGCCATTCCGGTGGCGGGCATCTTCGGCAATCCGCTGTCGGGCTGGATCATGGACGCCTTCCACGGCGTGTCGTCGAT
GCAGGGCTGGCAGTGGATGTTCATCATCGAAGCCGTTCCGGCCGTGCTCGTGGGGGTGATGGTGCTGCTCTACCTGGACA
ACGGCATCCAGCATGCGCGCTGGCTCTCGCCCGAAGAAAAGAGCCTGCTGCAGCGCGAGGTCGAGCGCGACCAGGCGCAT
GGCGCCAAGGGGCCGCACTCGGTGGCCGCCATGTTCCGCGACATGCGCGTGTGGTGGATGGCGCTCATCTACTTCGCCTT
CGTGATGGGCCAGTACGCGCTGACCTTCTGGCTGCCCACGCTGGTCAAGGCCACGGGCGTGAAGGGCAACCTGCACATCG
GGCTCCTGAGCGCCATTCCGTTCATCTGCGCGATCGTCGCGATGAACCTCTTCGGCCGCAGCGCCGACCGCCGGCAGGAG
CGCCGCTGGCACCTGATCGTGCCCGCGCTGATGGGCGCGGTGGGCTTCACGGTGGCCGCGTCGTACACGCAGAATACGGT
CGTGTCGCTCGCATTCCTCTCGCTCGCCGCGGCCGGCGTGCTGACCTGCGCGCCGCTCTTCTGGTCGTTGCCCACCGCCT
TTCTCTCGGGCACGGCGGCAGCGGCCGGCATTGCGGCCATCAACTCGGTGGGCAACCTCGCGGGCTTCGCGAGCCCGTAC
CTCATCGGCTATCTCAAGGACCTGACGGGCAGCACGCAGATCGGCATGTACGTGCTGGCCGGTGCGCTGGTGCTCGGGGC
CATCGGCGTGTGGCTCACGCCCAAGCAACTCGTCAACCGTTGA

Protein sequence :
MTSSTLPAGAMPVSADAALEKRAYAKVFWRLVPFLMLCYVVAYLDRVNVGFAKLQMGQDLGFSETVFGLGAGIFFLGYFL
FEVPSNLLLSRVGARIWIARIMITWGLLSACFVFVETPTSFYILRFLLGVAEAGFYPGVILYLTHWYPAHRRARIIAVFM
SAIPVAGIFGNPLSGWIMDAFHGVSSMQGWQWMFIIEAVPAVLVGVMVLLYLDNGIQHARWLSPEEKSLLQREVERDQAH
GAKGPHSVAAMFRDMRVWWMALIYFAFVMGQYALTFWLPTLVKATGVKGNLHIGLLSAIPFICAIVAMNLFGRSADRRQE
RRWHLIVPALMGAVGFTVAASYTQNTVVSLAFLSLAAAGVLTCAPLFWSLPTAFLSGTAAAAGIAAINSVGNLAGFASPY
LIGYLKDLTGSTQIGMYVLAGALVLGAIGVWLTPKQLVNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96055.1 major facilitator family transporter Not tested T-PAI Protein 4e-109 58
unnamed AAT96099.1 major facilitator family transporter Not tested T-PAI Protein 4e-109 58
unnamed AAT96228.1 major facilitator family transporter Not tested T-PAI Protein 4e-109 58
unnamed AAT96176.1 major facilitator family transporter Not tested T-PAI Protein 4e-109 57
unnamed AAT96116.1 major facilitator family transporter Not tested T-PAI Protein 1e-109 57
hpaX AAO17186.1 HpaX Not tested tcd island Protein 5e-63 43