Gene Information

Name : VAPA_1c53460 (VAPA_1c53460)
Accession : YP_008519071.1
Strain :
Genome accession: NC_022247
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, LuxR family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5617105 - 5617731 bp
Length : 627 bp
Strand : -
Note : -

DNA sequence : 
ATGCAACCGCTGATCGACGGTCTGATCTTCATCGTGGACGACGACGCCAGCGTGCGCGAGGCGCTGGCCTGGCTGCTGCG
TTCGCGCCGCCTCGAGAGCGAGCACTTCGCGAGTGCCGAGGCCTTCGAGCTGCGCCTGGCCGAAGGCCCGCTGCCCGAGC
AGCCGCTGTGCCTGCTGCTGGACGTGCGCATGCCCGGCACCAGCGGCCTGGTGCTGTTCGACCGCCTCGCGGAGCGCGGC
CTGCTGGACGCCATGCCGGTGATCTTCCTGACCGGCCATGCCGATGTGCCGACGGCGGTGGATGCGGTGAAGCGGGGTGC
CTTCGACTTCTGCGAGAAGCCGTTCTCCGACAACGCCCTGGTCGACCGCCTCGAGCAGGCGCTGGGCGCTTCGCTGCGGG
CGCTGGAGGTGCGGCGCGTGCGGCGTGGCCTGGCCGGCCGCATCGCCGAACTCACCGACCGCGAGCGCGACGTGATGCGG
CTCGTGGTCGAGGGCCTGCCGAACAAGCTGATTGCCGATCAGCTGGCGATCAGCGTGCGCACGGTGGAGGTCCACCGCGC
GCGCGTGTTCGACAAGATGGAAGTGAAATCGGCGGTCGAGCTGGCCAACCGCCTGCGGGATCTCTAG

Protein sequence : 
MQPLIDGLIFIVDDDASVREALAWLLRSRRLESEHFASAEAFELRLAEGPLPEQPLCLLLDVRMPGTSGLVLFDRLAERG
LLDAMPVIFLTGHADVPTAVDAVKRGAFDFCEKPFSDNALVDRLEQALGASLRALEVRRVRRGLAGRIAELTDRERDVMR
LVVEGLPNKLIADQLAISVRTVEVHRARVFDKMEVKSAVELANRLRDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-20 43
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-20 43
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-20 43
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-20 43
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-20 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAPA_1c53460 YP_008519071.1 two component transcriptional regulator, LuxR family VFG0488 Protein 7e-21 43