Gene Information

Name : VAPA_1c06260 (VAPA_1c06260)
Accession : YP_008514429.1
Strain :
Genome accession: NC_022247
Putative virulence/resistance : Virulence
Product : type VI secretion protein, VC_A0107 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 692621 - 693139 bp
Length : 519 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCAAGAGCAGTCAGAAATTCATCGCCCGCAACCGGGCGCCACGCGTGCAGATCGAATACGACGTGGAACTCTACGG
CGCCGAGAAGAAGATCCAGCTGCCCTTCGTGATGGGCGTGCTGGCCGACCTGTCGGGCAAGCCGGCCGATCCGCTCGCGC
CCGTGGCCGACCGCAAGTTCCTCGAGTTCGACGTCGACAACTTCGACTCGCGCATGAAGGCCATGAAGCCGCGCGCCGCC
TTCGCGGTGGAGAACTCGCTCACCGGCGAAGGCGAACTCAAGGTCGAGCTCACCTTCGAGAACATGGAAGACTTCTCGCC
CGCCGCCGTGGCCAGGAAGGTCGGCGCGCTCGACAAGCTGCTCGAGGCGCGCACCCAGCTGTCGAACCTCGTGACCTACA
TGGACGGCAAGAACGGCGCCGAGGAACTGCTGGCCAAGGTGCTCGAAGACCCGGCCCTGCTGCAGTCGCTGGCGGCCACC
GCCAAGCCCGACGACGAAGCGGCCAAGCCGGCCGCCTGA

Protein sequence : 
MAKSSQKFIARNRAPRVQIEYDVELYGAEKKIQLPFVMGVLADLSGKPADPLAPVADRKFLEFDVDNFDSRMKAMKPRAA
FAVENSLTGEGELKVELTFENMEDFSPAAVARKVGALDKLLEARTQLSNLVTYMDGKNGAEELLAKVLEDPALLQSLAAT
AKPDDEAAKPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 2e-56 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAPA_1c06260 YP_008514429.1 type VI secretion protein, VC_A0107 family VFG2069 Protein 1e-58 78