Gene Information

Name : Ser39006_2860 (Ser39006_2860)
Accession : YP_008523242.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : Tir chaperone family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3146107 - 3146529 bp
Length : 423 bp
Strand : -
Note : PFAM: Tir chaperone family protein; KEGG: DspFAvrF family protein

DNA sequence :
ATGACATCAGCACAACAGAGAGCGGCTCATTTGCTGCATTACTTTGGCCGTTCCTGCCGGACGGAAATCACGCTTAATGA
GGGTATTTGTGTTCTGCTTGGCGATGATGGTCAGGAAGCCGCAGTCATTGAAGTACCGGAACATGGCGATAGTCTACTGG
TTCATTGCCAGATACTGAACCTGCAAGGGGAAGAGAACCCGGTTGTTTATAAATTGATGCTGCAACTGAACTTTGAAATG
GCGGCGATGCGCGGCTGCTGGCTGGCGCTGGATGAATATTACAATCTACGTCTTTGCGCCCAACATTCACTGGCAACCCT
GGATGAAGCCAGGTTTAGCGCTATCTTGTCCGGTTTTATTCAGCAGGTGAAAGAGACGCAGAGTTTTATCGCTTCATTAT
TGGAAAAAACACGAGCAGCCTGA

Protein sequence :
MTSAQQRAAHLLHYFGRSCRTEITLNEGICVLLGDDGQEAAVIEVPEHGDSLLVHCQILNLQGEENPVVYKLMLQLNFEM
AAMRGCWLALDEYYNLRLCAQHSLATLDEARFSAILSGFIQQVKETQSFIASLLEKTRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dspF AAC04851.1 DspF Virulence Hrp PAI Protein 1e-36 54
avrF AAT96351.1 AvrF Not tested S-PAI Protein 5e-19 41
avrF AAT96271.1 AvrF Not tested S-PAI Protein 5e-19 41
avrF AAT96312.1 AvrF Not tested S-PAI Protein 5e-19 41