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Name : Ser39006_2900 (Ser39006_2900) Accession : YP_008523282.1 Strain : Serratia sp. ATCC 39006 Genome accession: NC_022268 Putative virulence/resistance : Virulence Product : type III secretion outer membrane pore, YscC/HrcC family Function : - COG functional category : - COG ID : - EC number : - Position : 3197321 - 3199393 bp Length : 2073 bp Strand : - Note : KEGG: type III secretion outer membrane pore, YscC/HrcC family; TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein, NolW domain protein, TraK family protein DNA sequence : ATGCGTCGTAACACGTTGTATACCATCCTGTTTACCCTTTATCGCTGGTTTTGCTGGTCATTGGTTTTTTTGGGTATGGT TCCTATGGCGCACTCATCCACACCGACTGAATGGCGCAAGGGGGCTTATGCCTATTCCGCAGAACAGACGCCGTTATCGG AAGTATTGCAGGATTTTGCTAATAGCCATGGCGTGGATCTGGTGCTGGGCCATATTCCGGACGTGAGTGTGGACGCTAAA ATCAGAGCCGACAATCCGGTTGCTTTTCTTGACCGACTGGCGCTGGAGTACCGTTTCCAATGGTTTGTTTATAACACGAC CCTTTATGTGAGTGCGAAGGATGAACAAACCTCGGTACGGCTGGAAATTTCCCCCGAAGCGGCACCCGATCTGAAGCAGG CGCTGACCGGAATCGGGTTGCTGGATTCTCGTTTTGGCTGGGGTGAGTTGCCGGATGATGGCGTAGTGCTGGTTACCGGC CCGGCAGAGTATGTAAACCTGATCCGCCGTTTTAGCCAACAGCGGGAAACCAAGGATGATCGCCGCAAAGTCATGCTCTT TCCTCTGCGATACGCTTCCGTTTCTGACCGGACTATCCAGTATCGGGGTCAGAATCTGATTATCCCCGGAGTGGCCACCA TTTTAAGCGAACTGATGGATGGTAATCGAAACCTTCCAGCCGGAGCGGCGGCGAGCAGCAATGGCAACGCTGAAAACGCA GCCGGTGGGCCGATGGCAATAGCGGATAGCGGAATGCGGGCGATACAGAACAGCGCCAGCTCAATGCTGGTGCGTCTGGC AACCCGCGGCAGTGCTGGCCGGGAGGCCGGGAGCCGTCAGCGTGACGCACAACTTAATGGCAAAGTATCGGCAGATGTGC GGAATAACGCGTTGTTAATTCGTGACGATGAAAAACGGCGTGATGAATATCAGCAGCTTATCGACAAGATCGATGTTCCG CAGAAGTTGGTCAATATTGACGCCGTTATTCTGGATATTGACCGCACGGCCCTGTCGCGGCTGGAAGCCAACTGGCAGGG GAAATTGGGTGCGGTAACGGGCGGTGTCAGCATGATGTCAGGGTCCAGTACCTTATTTATCAGCGATTTTAAACGCTTCT TTGCTGATATCCAGGCGCTGGAGGGCGAGGGTACGGCCTCTATCGTGGCGAATCCTTCCGTGTTAACGCTGGAGAATCAG CCTGCGGTCATTGATTTTAGTCGGACGGCATTTATTACCGCGACTGGTGAGCGGGTCGCCAATATTCAACCCATTACTGC CGGAACCAGCCTACAGGTGACACCACGAGTAGTGGGACAAGGTCGTCAGAGTAGTATCCAATTGGTGATTGATATTGAAG ATGGGCAAGTCGAAACCAATACCGACGGCAATGCCTCCGGTGTTAAGCGCGGCACGGTGAGTACACAAGCGTTGATTGGT GAAAATCGCTCGCTGGTATTGGGCGGCTTTCATGTAGAGGAGAGTGGTGATCGTGACAAACGGATCCCGCTACTGGGCGA TATTCCCTGGATCGGTAAACTGTTCACTTCCCGGCAGCATGAAATTTCCCGACGTGAACGATTGTTCATCCTGACACCCC ATCTTATTGGTGATCAAACTGACCCCTCCCGCTATGTTTCGGCGGATAACCGACGTCAATTGAATGACATGATAGGACGG GTATCGCAGCGTAACAGCAAAACCGATTTCTACAATGTGGTTGAAAATGCATTGCGCGATCTGGCCAACGGGCAAACACC CGCCGGTTTTACCACCGAACACACTGGCACCCGATTGAGTGAAATCTGTCGCCCGAATATGTCGCTGTTGTATGAAGGGA GTCGTAATCAATGGTACAGCACGTCTGCGGTCAATCTCACTGTGGGCGTTGTGAAGAACACCGGCAATCGCCCTCAACGT TTTGATGAAGCCAGTTGTTCCGGCAATCGCACGTTGGCGGTAGCCGCCTGGCCTAAAACCATGTTGGCTCCCGGTGAATC CACCGAGGTATATTTGGCGTTGCAAGCGTCTCGTAACGTGCAACCTTCCAGAACCTCGTTAATCAAACCATAA Protein sequence : MRRNTLYTILFTLYRWFCWSLVFLGMVPMAHSSTPTEWRKGAYAYSAEQTPLSEVLQDFANSHGVDLVLGHIPDVSVDAK IRADNPVAFLDRLALEYRFQWFVYNTTLYVSAKDEQTSVRLEISPEAAPDLKQALTGIGLLDSRFGWGELPDDGVVLVTG PAEYVNLIRRFSQQRETKDDRRKVMLFPLRYASVSDRTIQYRGQNLIIPGVATILSELMDGNRNLPAGAAASSNGNAENA AGGPMAIADSGMRAIQNSASSMLVRLATRGSAGREAGSRQRDAQLNGKVSADVRNNALLIRDDEKRRDEYQQLIDKIDVP QKLVNIDAVILDIDRTALSRLEANWQGKLGAVTGGVSMMSGSSTLFISDFKRFFADIQALEGEGTASIVANPSVLTLENQ PAVIDFSRTAFITATGERVANIQPITAGTSLQVTPRVVGQGRQSSIQLVIDIEDGQVETNTDGNASGVKRGTVSTQALIG ENRSLVLGGFHVEESGDRDKRIPLLGDIPWIGKLFTSRQHEISRRERLFILTPHLIGDQTDPSRYVSADNRRQLNDMIGR VSQRNSKTDFYNVVENALRDLANGQTPAGFTTEHTGTRLSEICRPNMSLLYEGSRNQWYSTSAVNLTVGVVKNTGNRPQR FDEASCSGNRTLAVAAWPKTMLAPGESTEVYLALQASRNVQPSRTSLIKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcC | AAB49179.1 | HrcC | Virulence | Hrp PAI | Protein | 0.0 | 67 |
| hrcC | AAT96354.1 | HrcC | Virulence | S-PAI | Protein | 9e-166 | 53 |
| hrcC | ABA47303.1 | HrcC | Virulence | S-PAI | Protein | 5e-169 | 52 |
| hrcC | AAT96274.1 | HrcC | Virulence | S-PAI | Protein | 2e-162 | 52 |
| hrcC | AAT96315.1 | HrcC | Virulence | S-PAI | Protein | 7e-163 | 52 |
| hrcC | NP_791216.2 | outer-membrane type III secretion protein HrcC | Virulence | Hrp PAI | Protein | 2e-140 | 45 |
| hrcC | AAB05085.2 | HrcC | Virulence | Hrp PAI | Protein | 8e-141 | 45 |
| hrcC | AAC34756.1 | HrcC | Virulence | Hrp PAI | Protein | 9e-135 | 44 |
