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Name : Ser39006_2921 (Ser39006_2921) Accession : YP_008523303.1 Strain : Serratia sp. ATCC 39006 Genome accession: NC_022268 Putative virulence/resistance : Virulence Product : type III secretion protein SpaR/YscT/HrcT Function : - COG functional category : - COG ID : - EC number : - Position : 3216114 - 3216911 bp Length : 798 bp Strand : + Note : KEGG: hrcT, type III secretion inner membrane protein; TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein DNA sequence : ATGATCTCCACGATTGAAAGCATCTACCACTTTCTGTTCGCCATCACGCTGGGCGTCGCCCGCCTCTACCCTTGTCTGTT TCTAATACCGATATTTTCCTTCACGGTGGTCAAAGGGATGTTACGCAATATTGTCGTGATAACACTGGCACTGGTACCCG CTACCGCCATTCAACAACAACTCATGGTAACTGACCTTAGTTGGTTGATATTGACAGGGCTGCTGCTGAAGGAAATGGTT GTCGGGTTATTGTTGGGGTCACTGCTATCCATGCCGTTTTGGATGTTTGAATCCGTGGGCGCACTGTTTGACAACCAGCG CGGAGCATTGATCGGCGGGCAACTGAACCCGGCGCTGGGCCGAGATGTCACGCCGCTCGGTCATCTGCTGAAAGAGACAT TTATTCTGCTGCTGATATTAACCATCGGTATCTCCGGCCCAATGCAAGTGATCTGGGACAGTTATCAGATCTGGCCACCC CTGCAATGGCTCCCACCATTGTCTGAGCAAGGATTTCACACCTATCTGGATCTGTTAAAAGAAACCTTCAGCCACATGGT GGTGTATGCCGGTCCACTGGTGGCACTGTTGTTGTTACTGGAATTCAGCATCGCCATGCTCAGTCTCTATAGCCCGCAAC TACAGGTTTACGTACTATCGGTACCGGCAAAATGCCTGGCCGGTATGTCATTCTTTATTGTCTATATGCCAGTAGTGCAA TTTCTTGCAGAGGGTCGAATTATGGCCTTGCCCGACCTGAAATATCTGTTGCCGCTGTTTTTTTCCGTTCAACCCTGA Protein sequence : MISTIESIYHFLFAITLGVARLYPCLFLIPIFSFTVVKGMLRNIVVITLALVPATAIQQQLMVTDLSWLILTGLLLKEMV VGLLLGSLLSMPFWMFESVGALFDNQRGALIGGQLNPALGRDVTPLGHLLKETFILLLILTIGISGPMQVIWDSYQIWPP LQWLPPLSEQGFHTYLDLLKETFSHMVVYAGPLVALLLLLEFSIAMLSLYSPQLQVYVLSVPAKCLAGMSFFIVYMPVVQ FLAEGRIMALPDLKYLLPLFFSVQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcT | AAB06007.1 | HrcT | Virulence | Hrp PAI | Protein | 3e-52 | 65 |
| hrcT | AAT96345.1 | HrcT | Virulence | S-PAI | Protein | 1e-45 | 59 |
| hrcT | AAT96264.1 | HrcT | Virulence | S-PAI | Protein | 9e-46 | 59 |
| hrcT | AAT96305.1 | HrcT | Virulence | S-PAI | Protein | 9e-46 | 59 |
| hrcT | ABA47281.1 | HrcT | Virulence | S-PAI | Protein | 2e-45 | 57 |
| hrpX | AAB05077.1 | HrpX | Virulence | Hrp PAI | Protein | 2e-37 | 51 |
| hrcT | ABQ88361.1 | HrcT | Virulence | Hrp PAI | Protein | 2e-37 | 51 |
| hrcT | AAT96148.1 | HrcS | Virulence | T-PAI | Protein | 2e-36 | 49 |
| hrcT | AAT96202.1 | HrcT | Virulence | T-PAI | Protein | 2e-36 | 49 |
| hrcT | NP_791220.1 | type III secretion protein HrcT | Virulence | Hrp PAI | Protein | 4e-34 | 48 |
| hrcT | AAG33886.1 | HrcT | Virulence | Hrp PAI | Protein | 3e-34 | 48 |
