Gene Information

Name : M892_19975 (M892_19975)
Accession : YP_008528554.1
Strain :
Genome accession: NC_022270
Putative virulence/resistance : Virulence
Product : peptidase C39
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 465233 - 467377 bp
Length : 2145 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGTTAGGGCTTACCCAAAACGGGATGCGCTGTCGCACAGTGCTGTCGTAAGCTCTCAGGTTTTGCTCAAGCTTTTGGG
CGTCTCTTGTCAAATGCCAACAGAGCATCCAGGAGGCGATCTAAAAGGCTGGCTCAAGAAAGCGTCAGGTCAAACTGATG
GTCAACTGAGATTAAAACGACTCTCAGAAAACACACTCACGGCTTCACATTTGCCTCTTGCGTATCAACAGCACGATGGC
GAATTTGTGGTGCTCGCTCGATTGTCTGATGACCAAGCGTTGATCCAACGTCATCACGAGCAAACCCCCCAAGTCATCTC
AAGAACCACGCTTGAAGAAGCCTGGGCAGGCCAAGTGATCCAATATCACGAAAGCGGGCGTCAGTTTGATATTCGCTGGT
TTATCCCGGAGTTTATTCGACATCGTGGCTTACTGGGCGAAATCCTGTTCTTTTCCCTCCTCCTTCAGATGCTCGCACTG
GTGCTCCCACTATTTTTCCAAGTGATCATGGACAAAGTGCTGGTGCACAATGCGCTGTCGACACTTGACGTGTTAGTTGT
GGCATTGGTGGTGGTCGGTCTCTTCGAAGTGATATTGAAAGGACTGCGGGAATATTTGTTGGCGCACACCACGACGCGTA
TCGACATTCGGCTTGGCACAAAACTCTTTAAACACTTACTTGGGCTGCCCCTGCTTTACTTCAAAAATCGCCATGTGGGC
GCGATCGTCACTCGAGTTCGTGAGCTCGACAGTATTCGAAACCTGCTCACCGGCGCGGCGTTAACTTTGTTGGTGGATGT
CAGTTTTACCTTTGTTTTCCTGGGTGTGATGGTCTATTTGTCTGCACCTCTGACGGCACTCGTCATCGCGACCTTGCCAC
TGTATGCCTTGCTTGCATGGGCGACGTCCGAGCCACTCAAGCGCCGTATCGAGCACCAGTTCGCTTGTGGGGCCAAAAAC
ACCGCCTTTTTGACGGAATCGCTCAATGGCGTGGAGACAGTGAAAAGTCTGGCCCTAGAACCCCGGTTTGAACGCCGCTG
GGAAGGACAGACTCAAGAACTGGTTGCGGCCAACTTTTCGCGTCAAAGTTTCCAAGCGCAAGTCAGTCAATGCGTCACAC
TATTGCAAAAAGTCACCTCGGTTGGTGTCCTCTGGCTGGGCGCCCAGATGGTGATGTCTTTGGAATTGACGATTGGTCAG
TTGATTGCGTTTAATATGATGGTCAACCATGTGAGTCAGCCCCTCGCCAAACTCGTAGAACTTTGGCAGCAGTTTATCCA
AACACGCGTTGCCGTCGACAACCTGAGTGAAATGCTCAATCTGCCTGCGGAACAAGAGATGGGCGAGTTCCAACCTAACG
CACCAATCCAAGGGCACATCGAGTTTCAACAAGTGTGGTTTCGCTACCAGCCGCAACTGGCACCAGTGTTACATGGCCTC
TCTTTAACGATCAAACCGGGCGAGTCTATCGGATTGGTGGGGCCTTCTGGCTCTGGAAAAAGTACCGTGACGCGCCTTAT
TCAAAAACTCTACCTGGCCGAAAAAGGCCAAGTCCTGATCGATGGTACGCCACTCAATCAATGGTCTGCTGCGGCCCTCA
GGCAGGGCATTGGCGTGGTGTTGCAAGAAAACTATTTGTTCCACCGAACGGTCCGGGAAAACATCGCCATCCGACAACCG
ACCGCGTCGTTTGAGGCGGTGGTTGAGGCTGCCAAACTCGCAGGCGCTCACGAGTTCATCATTAAAATGCCCAAAGGCTA
TGACACCCTGCTGGCAGAAGGGGGGGCGTCGTTATCCGGGGGCCAGAAACAACGAATCGCGATCGCTCGCGCGTTAATGA
CCCAGCCGCGCATCCTTATTTTTGACGAGGCCACTAGCGCTTTGGACGAAGAGTCCCAACGCATCGTCAACCAGAACATG
GCGAAGATCGCCCGGGGACGAACGGTGATCACCGTCGCCCATCGCCTATCGGCGGTTCAGGGTTGCGATCGCATCGCGGT
CATTGAACAAGGGGAAGTGACGGAGTTGGGTAACCATCAACACTTGTTAGCCCAACAAGGCTGCTACGCCCGGTTATGGC
ATATCCAGCAAAACAAACAAGTGGAATCTGTAGGTGAAGAGGTGTTGCCATGTTCCCAATCATAG

Protein sequence :
MVRAYPKRDALSHSAVVSSQVLLKLLGVSCQMPTEHPGGDLKGWLKKASGQTDGQLRLKRLSENTLTASHLPLAYQQHDG
EFVVLARLSDDQALIQRHHEQTPQVISRTTLEEAWAGQVIQYHESGRQFDIRWFIPEFIRHRGLLGEILFFSLLLQMLAL
VLPLFFQVIMDKVLVHNALSTLDVLVVALVVVGLFEVILKGLREYLLAHTTTRIDIRLGTKLFKHLLGLPLLYFKNRHVG
AIVTRVRELDSIRNLLTGAALTLLVDVSFTFVFLGVMVYLSAPLTALVIATLPLYALLAWATSEPLKRRIEHQFACGAKN
TAFLTESLNGVETVKSLALEPRFERRWEGQTQELVAANFSRQSFQAQVSQCVTLLQKVTSVGVLWLGAQMVMSLELTIGQ
LIAFNMMVNHVSQPLAKLVELWQQFIQTRVAVDNLSEMLNLPAEQEMGEFQPNAPIQGHIEFQQVWFRYQPQLAPVLHGL
SLTIKPGESIGLVGPSGSGKSTVTRLIQKLYLAEKGQVLIDGTPLNQWSAAALRQGIGVVLQENYLFHRTVRENIAIRQP
TASFEAVVEAAKLAGAHEFIIKMPKGYDTLLAEGGASLSGGQKQRIAIARALMTQPRILIFDEATSALDEESQRIVNQNM
AKIARGRTVITVAHRLSAVQGCDRIAVIEQGEVTELGNHQHLLAQQGCYARLWHIQQNKQVESVGEEVLPCSQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 1e-114 45
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 2e-114 45
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 2e-114 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M892_19975 YP_008528554.1 peptidase C39 VFG1269 Protein 5e-121 49
M892_19975 YP_008528554.1 peptidase C39 VFG0841 Protein 2e-106 46
M892_19975 YP_008528554.1 peptidase C39 VFG1557 Protein 1e-114 45
M892_19975 YP_008528554.1 peptidase C39 VFG1501 Protein 1e-114 45
M892_19975 YP_008528554.1 peptidase C39 VFG0907 Protein 6e-115 45