Gene Information

Name : M892_22405 (M892_22405)
Accession : YP_008529037.1
Strain :
Genome accession: NC_022270
Putative virulence/resistance : Virulence
Product : T6SS/protein (ImpB family) VasQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1021450 - 1021956 bp
Length : 507 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTCACGTGACGGCTCGGTGGCTCCTAAAGAGCGAATTAATATCCGTTATGTTCCAGCAACTGGTGATACGCAAGACGA
CGTAGAACTGCCGCTGAGCATGATGGTGGTTGGTGACTTTACTGCACGTGCAGATGAGACGCCTATCGAAGAACGTACTC
CAATCAATATCGACAAAGACAACTTTAACGAAGTGCTAGAAGGCATGTCTCCAAACGTTAAAGTGAACGTTGAAAACCGC
CTTTCTGACGAAGAAGGCGGCCAAATCGGTGTTGATCTAACGTTCCAAAACATGAAGGACTTCTCTCCTGAAGCGATCGC
GAAAAGCGTACCTGAGCTAAACAGCTTGCTTGAGCTTCGCGAAGCGTTGGTTGCACTGAAAGGCCCTCTAGGTAACGTTC
CTGCGTTCCGTAAGAAGATCGCATCGGTTCTTCAAGACGAAGAAGCGAGAAAGAAACTGTTGGATGAACTAAGCATTGGC
GACGACCAAGAAGCGAAAGAAGAGTAA

Protein sequence :
MSRDGSVAPKERINIRYVPATGDTQDDVELPLSMMVVGDFTARADETPIEERTPINIDKDNFNEVLEGMSPNVKVNVENR
LSDEEGGQIGVDLTFQNMKDFSPEAIAKSVPELNSLLELREALVALKGPLGNVPAFRKKIASVLQDEEARKKLLDELSIG
DDQEAKEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 4e-36 47
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-33 46
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 1e-33 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M892_22405 YP_008529037.1 T6SS/protein (ImpB family) VasQ VFG2092 Protein 8e-48 55
M892_22405 YP_008529037.1 T6SS/protein (ImpB family) VasQ VFG2474 Protein 9e-40 50