Gene Information

Name : SCD_n01139 (SCD_n01139)
Accession : YP_008546005.1
Strain : Sulfuricella denitrificans skB26
Genome accession: NC_022357
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1148595 - 1149818 bp
Length : 1224 bp
Strand : +
Note : K11473

DNA sequence :
ATGCAAACCGCAATTGCTGATAGTATTTTACAGCGCGCAGAAATTGCCGAAGCCGACGCGGTTTTGCGTGCCTGCGTACA
TTGCGGGTTTTGCAACGCCACCTGCCCCACTTATCAGTTGCTGGGTTCCGAACTGGATGGACCACGCGGACGGATTTATC
TGATCAAGGAAATGCTGGAAGGCAATCAATCCAGCGCCAAGACACGTTTGCATCTGGATCGCTGCCTGACCTGCCGCTCC
TGCGAAACCACCTGCCCATCCGGCGTGCAGTTTGGTCGTCTCATTGATATCGGGCGCCAGGAGATCGAAAGGCGTTCACC
ACGCTTGCTGTGGGCCGGTATGGCGCGGCACGTGTTGCTGGGCGTATTGCCTTACACTTCTCGCCTACGCGTTGCATTTG
CCTTGGGCAGGCTTGCGCGCCCGCTGTTGCCGGCAATGCTGCGCCACAAACTACCGCGCGCGCGCAAACCCTTGCCGCGT
CCTCAAACACAAAATCAACGCCGCATGCTAGTGCTGGAAGGCTGCGTGCAGCCGCTGGCGGCCCCCACAACCAATGCTGC
TGCTGCAAGTGTGCTGGATAAGCTCGGCATTGGCCTGGTCAGCGCGCCCCAAGCCGGTTGCTGCGGCGCCATGCACCAGC
ATTTGGCGGCGGCCGATAGCGCGCGAGAAATGATGCGCCGCAACATTGATGCGTGGTGGCCTTATGTCGAGCAAGGAATT
GAAGCAATCGTGATGACCGCGAGCGGCTGCGGTGTGATGGTGAAGGATTATGGGTACGCCCTCAAGGACGACACGGCCTA
CGCTGCCAAGGCGGCTCGCATCAGCGCCCTCACCCGTGATTTGAGCGAGATTCTGCGCGATGAAAATCTGGACCTGTTTG
CCGGCATCGGAAAGGGGCGACGCGTTGCATGTCAGTCTTCCTGCACGCTGCAGCACGGACAGAAACTGGGCGGCGAGGTT
GAAAAGATTCTGCAATATTGCGGTTATACGCTCACGCCGGTTGCAGACAGCCATCTGTGCTGTGGTGCTGCGGGTACTTA
CACCCTGCTGCAGCCGGCATTGTCGCAACAACTGCTGAATCAAAAGATTACCGCGTTGCTGCAGGCTGAACCCGATGTGA
TTATCACCAGCAATATCGGCTGCCAGTTACATCTGGAAAGCGCCAGCAAGGTGCCGGTGCGACACTGGATCGAATTACTG
GTACACCCTCAATCCTCAATCTAA

Protein sequence :
MQTAIADSILQRAEIAEADAVLRACVHCGFCNATCPTYQLLGSELDGPRGRIYLIKEMLEGNQSSAKTRLHLDRCLTCRS
CETTCPSGVQFGRLIDIGRQEIERRSPRLLWAGMARHVLLGVLPYTSRLRVAFALGRLARPLLPAMLRHKLPRARKPLPR
PQTQNQRRMLVLEGCVQPLAAPTTNAAAASVLDKLGIGLVSAPQAGCCGAMHQHLAAADSAREMMRRNIDAWWPYVEQGI
EAIVMTASGCGVMVKDYGYALKDDTAYAAKAARISALTRDLSEILRDENLDLFAGIGKGRRVACQSSCTLQHGQKLGGEV
EKILQYCGYTLTPVADSHLCCGAAGTYTLLQPALSQQLLNQKITALLQAEPDVIITSNIGCQLHLESASKVPVRHWIELL
VHPQSSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 1e-94 53