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Name : lysS (SCD_n01828) Accession : YP_008546671.1 Strain : Sulfuricella denitrificans skB26 Genome accession: NC_022357 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1848748 - 1850256 bp Length : 1509 bp Strand : + Note : K04567 DNA sequence : ATGACCCAAGAACAAATTAGCCCACCCCAGGACGAAAACCAGCTCATCGCCGAGCGCCGTGACAAGCTGAAGAAGCTGCG CGAAACAGGCATCGCCTTCCCCAATGACTTCGACCGCAAGGATGTGGCGGGTGATTTGCTGGCGGCTCATGGCAACAAGG ACAAGGAAGCGCTGGAAGCGGAAAACGTCAGCGTCGCCCTCGCCGGCCGCATGATGCTGAAGCGCGTGATGGGCAAGGCC AGTTTCGCCACGGTGCAGGACATGAGCGGCCGCATCCAGTTCTACATCAACGACGAGGGCGTCAGCGCCGAGACCCACGA GGCTTTCAAGCACTGGGACATGGGCGACATCATCGCCGCCAAAGGCACCCTGTTCAAGACCAACAAGGGCGAGCTGTCGG TGCGCGTTTACGAACTGCGCCTGCTGACCAAATCCCTGCGTCCGCTGCCGGAAAAATTCCACGGCCTGACCGACCAGGAA GCGAAATATCGTCAGCGCTACCTCGACATGATCACCAATGAGGAAACCCGCAAGACCTTTATCGTGCGCACCAGGATCAT CCAGTCGATCCGCACTTTCCTGGTGGATCGCGGCTACCTCGAAGTGGAAACGCCGATGATGCATCCCATCCCCGGCGGCG CCTCGGCCAAACCCTTCACCACCCACCATAACGCGCTGGACATGGAGCTGTTTCTGCGCATCGCACCTGAGCTCTACCTC AAGCGCCTGGTCGTGGGCGGCTTTGAAAAGGTGTTCGAGATCAACCGCAACTTCAGGAATGAGGGCCTCTCCACCCGCCA CAATCCTGAATTCACCATGATCGAATTCTACGAAGCGTACCGGGATTACCGTTACATGATGGACCTGACCGAAGAAATGT TCCGCGAAACCGCCAAGGCCGTGCTCGGCCATGCGGTGGTGCAGTACCAGGGTCACACCATCAATCTGGCCCAGCCCTTC GACCGCCTCACCATCACCGAGTCGATCCACAAATACCATCCGGGGCGCTTCAGCGACGAACAGCTCAACGACCGCGCCTT CCTGAAAGCGCAGCTGGAAAAAATGGGTGCCGATCATCACCCTACCGATGGCGTCGGCGGGCTGCAATTGAGCCTGTTCG AGGAAACCACCGAACAGATGCTGATCCAGCCGACCTTCATCATCGACTATCCGGCCGAAGTCTCGCCGCTGGCGCGCAGC AACGATGCCGCCCCCGGCATTACCGAGCGCTTTGAGCTGTTCATCGTCGGTCGCGAGATCGCCAACGGCTTCTCCGAGCT GAACGACCCGGAAGATCAGGCAGAGCGTTTCATGGCGCAGGTACGACAGAAGGAAGCGGGAGATGCCGAAGCGATGCACT ACGACGCCGACTACATCCGCGCTCTGGAATACGGCCTGCCACCCACTGCCGGCGAGGGCATCGGGATTGATCGTCTGGTC ATGCTACTAACCGACAGCCCGAGTATCCGCGACGTGATCCTGTTCCCGCAGATGCGGAAGGAAGATTGA Protein sequence : MTQEQISPPQDENQLIAERRDKLKKLRETGIAFPNDFDRKDVAGDLLAAHGNKDKEALEAENVSVALAGRMMLKRVMGKA SFATVQDMSGRIQFYINDEGVSAETHEAFKHWDMGDIIAAKGTLFKTNKGELSVRVYELRLLTKSLRPLPEKFHGLTDQE AKYRQRYLDMITNEETRKTFIVRTRIIQSIRTFLVDRGYLEVETPMMHPIPGGASAKPFTTHHNALDMELFLRIAPELYL KRLVVGGFEKVFEINRNFRNEGLSTRHNPEFTMIEFYEAYRDYRYMMDLTEEMFRETAKAVLGHAVVQYQGHTINLAQPF DRLTITESIHKYHPGRFSDEQLNDRAFLKAQLEKMGADHHPTDGVGGLQLSLFEETTEQMLIQPTFIIDYPAEVSPLARS NDAAPGITERFELFIVGREIANGFSELNDPEDQAERFMAQVRQKEAGDAEAMHYDADYIRALEYGLPPTAGEGIGIDRLV MLLTDSPSIRDVILFPQMRKED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-136 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008546671.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-137 | 57 |
