Gene Information

Name : N646_4399 (N646_4399)
Accession : YP_008549276.1
Strain :
Genome accession: NC_022359
Putative virulence/resistance : Virulence
Product : putative ClpA/B-type chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1439625 - 1442192 bp
Length : 2568 bp
Strand : -
Note : -

DNA sequence :
ATGGCTTCACTCTCACTTTCAGCGTTGGTCGAAAGATTGTCTCCTCAGGCTAAGGAAACACTTGAACAGGCAGCTGCGAT
GGCAAGCTCCCGAACTCATCACAGTATTGAAATGTCTCACTGGTTAATGATGATTATCCGCCATCCTGACGATATTTACT
CTGAAGTTTTTGACGAATTTGATGTCGATAAAATCAAGGTTGAAACCGATATTCAAAAGGCATTAGAAAAATACAAAACA
GGATGCCAGTCGGTGCCTGGGCTATCAGCTCATACGGTGACTGTTATGCAAAATGCCTTGTTGTCTGCAACCATTGAATT
CAATCAAGAACAGTTGGGGTGCATCCATCTTTTATTTGCCTACTTGTCTGATGATACGTTAGTCAACATGGCTGGTTCGA
TTAGTCCTGAACTAAACAAGATAGAACCATCTCGCTTATTGAACTTTAAAGAAAGTAATGCGCCTCAATCAAGATCGAAT
GACTTAGCGCAGTCAAACGCGAATTCCGCCTTGAATCAATTTACAACAGACCTTACTGAGCAAGCTAGGGAAGGTAAAAT
AGATCCGGTGATTGGTAGAGATAATGAAATTCGCCTAATGATCGATATTTTATTAAGACGCCGACAAAACAACCCGATTC
TTACGGGAGAAGCTGGTGTTGGAAAAACAGCCGTTGTTGAAGGTTTGGCGCAAAAGATCATTGATGGCGATGTACCTCCC
GCTCTGCAAAATGTGGCAATTAAGTCTCTGGATTTGGCGTTACTGCAAGCCGGCGCAGGCATGAAAGGTGAGTTTGAAAA
CAGGCTTAAGAACCTTGTTAAGGAAGTAAACGACGCTCCACAGCCTATTATATTGTTCATTGATGAAGCTCATGGCCTAA
TTGGCGGTGGTGGGCAAGCGGGCCAAGGTGATGCGGCGAATATTCTGAAGCCAGCATTAGCGAGAGGTGAACTCAGAACG
ATCGCAGCAACAACGTGGGCAGAGTATAAAAAGTATTTTGAAAAAGATGCAGCTTTAACTAGGCGTTTTCAAGTCGTAAA
GGTTGATGAGCCTGCCCCTGAACTCGCGATCGAAATGTTACGAGGCTTACTTGATGTAATGGCACAACACCACGATGTTC
ATATCACTAACCAAGCTCTCAATGCAGCGGTCCAACTGTCAGCTCGATACATTAATGGTCGTCAACTGCCAGATAAAGCG
GTTTCTGTTTTGGATACGGCCTGTTCTCGAGTTGCGTTAAGTCAGTCATCTACACCGGGAGGCCTAGATGCGAAAAGAAA
CAAACTTAAAGCAAAGCAAGCTGAGTATGAGCATCTTAGCCAAGAGAGTCGGCTAGGAGCATCTCTTGATGTGCAGCTGC
AAGGTGTCCGAAAAGAGATTGATGCGCTATCTAATGACATTATTGAATTAGAAGTACTTTGGGAAAAAGAAAAAGAATGG
GTAAATGAAGCTAAGTCACTTAGAACCCAAATAATCCAGGAGGGTTCTGAAACTGCTAGAGACAAGTTACAAGAGCTTGA
AAATAACCTTTCCGCTAACTCACAGCCCTTAGTTTTTTCGCATGTAAATGAAGCGCTAATCGCAGAAGTTATTTCGGATT
GGACCGGTATACCGCTAGGTAAACTTCAGGATGATGAAATCCAAGCAGTATTGGGTTTGAAAGAAAGTTTGTGTAAGCGA
GTTGTCGGGCAGGATCACGCTTTAGAGCTCATGTCTGAAGTGATAAAAACCGCGAGTGCGCAGCTCACGGATGAGACACG
ACCAAATGGTGTATTTCTCCTAACCGGACCAAGCGGAGTGGGTAAAACCGAATCGGCTTTGGCGATTGCAGAGAAAGTCT
ATGGTAGTGAAGAAAATGTCACGACTATCAATATGTCGGAATTTAAGGAAGAGCATAAAGTCTCATTGCTATTAGGTTCT
CCTCCTGGTTATGTCGGTTATGGAGAAGGAGGTGTACTGACTGAAGCTGTTAGACGTAAACCTTATAGTGTAATTCTCCT
CGATGAAATGGAAAAAGCGCACCCTGGTGTTCAAGATATTTTTTATCAGGTGTTTGATAAAGGCTCAATTAAAGACGGTG
AAGGTCGAGATATAGACTTTAAAAACACTATTATTATTATGACCGCGAACACAGGGACCGAAACGACGATGTCTTTGTAT
TCTGATCCTGATTTATCTCCTGAGCCGTCAGCACTAAAAGATGCTTTACGCGATGATTTGTTGGTCGACTTTAAACCTGC
ATTTTTAGGGCGTGTGAACGTATTACCTTATTTGCCTCTATCAAGAAAAGTATTGATAGAAATAACAAAATTAAAGTTGG
ATAAAATTACGACTCGTATTCGTAAGCACTATAACGCTGACCTGTTTTTTGATGAGGAACTAATTAATGATATTGTAGAC
AATAGCAATGAGTCTGGCAGTGGTGCGCGTGTGGTACAAACAACCATAGAAAATACATTGCTTCCGAAGATTTCTCATGA
AATATTGCATGCAATTCTTAATGATAAGACGTTTGATGAAATTATTGTTAAAGGTACAACTAGTGGACTTGATGTCTCAA
TAGTTTAA

Protein sequence :
MASLSLSALVERLSPQAKETLEQAAAMASSRTHHSIEMSHWLMMIIRHPDDIYSEVFDEFDVDKIKVETDIQKALEKYKT
GCQSVPGLSAHTVTVMQNALLSATIEFNQEQLGCIHLLFAYLSDDTLVNMAGSISPELNKIEPSRLLNFKESNAPQSRSN
DLAQSNANSALNQFTTDLTEQAREGKIDPVIGRDNEIRLMIDILLRRRQNNPILTGEAGVGKTAVVEGLAQKIIDGDVPP
ALQNVAIKSLDLALLQAGAGMKGEFENRLKNLVKEVNDAPQPIILFIDEAHGLIGGGGQAGQGDAANILKPALARGELRT
IAATTWAEYKKYFEKDAALTRRFQVVKVDEPAPELAIEMLRGLLDVMAQHHDVHITNQALNAAVQLSARYINGRQLPDKA
VSVLDTACSRVALSQSSTPGGLDAKRNKLKAKQAEYEHLSQESRLGASLDVQLQGVRKEIDALSNDIIELEVLWEKEKEW
VNEAKSLRTQIIQEGSETARDKLQELENNLSANSQPLVFSHVNEALIAEVISDWTGIPLGKLQDDEIQAVLGLKESLCKR
VVGQDHALELMSEVIKTASAQLTDETRPNGVFLLTGPSGVGKTESALAIAEKVYGSEENVTTINMSEFKEEHKVSLLLGS
PPGYVGYGEGGVLTEAVRRKPYSVILLDEMEKAHPGVQDIFYQVFDKGSIKDGEGRDIDFKNTIIIMTANTGTETTMSLY
SDPDLSPEPSALKDALRDDLLVDFKPAFLGRVNVLPYLPLSRKVLIEITKLKLDKITTRIRKHYNADLFFDEELINDIVD
NSNESGSGARVVQTTIENTLLPKISHEILHAILNDKTFDEIIVKGTTSGLDVSIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-149 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_4399 YP_008549276.1 putative ClpA/B-type chaperone VFG2076 Protein 2e-166 46
N646_4399 YP_008549276.1 putative ClpA/B-type chaperone VFG2084 Protein 6e-141 44