Gene Information

Name : N646_3260 (N646_3260)
Accession : YP_008548138.1
Strain :
Genome accession: NC_022359
Putative virulence/resistance : Virulence
Product : putative flagellar assembly protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 200043 - 200801 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAATCTGAGCGCTTGGCACCGTTGGTTACCTCTTTTGGTATTGGTGTCACTTTTGTTTGCTTTCCCAACAATGGC
GGCTGACAACGGCTTAACTATCTTGTCCGTTTCTGATGGCGACACACAACAAGAATACAGCGTTAAACTGCAAATTCTGT
TGTTGATGACGGCGCTCAGTTTTCTTCCAGCATTTATTTTGATGGCGACGAGCTTTACTCGAATTGTCGTTGTCCTTGCG
ATTTTGCGCCAAGCTCTTGGTCTTCAACAAAGCCCACCTAACAGAGTGTTGGTCGGGATCGCTCTCGCATTGACGTTACT
GATTATGCGCCCTGTCTGGAGCGATATTTATGAAAATGCGTTTCAGCCATACGACAACGGCGAAATCACGCTAATACAGG
CTTTTTCTGTTGCAGAGAAACCAGTGAGAGAGTTCATGTTGGCACAGACGCACCAAAGCTCTCTTGAACAAATGTTACGT
ATTGCCAATGAGCCTCTCGACCAAAACGTTGAGGATATTTCATTTGCCGTTGTCTTGCCTGCATTTGTCATTAGTGAACT
GAAAACCGCCTTCCAAATTGGTTTTATGCTTTTCATCCCGTTTTTGGTCATCGACTTGGTTGTCGCCAGTGTCCTGATGG
CAATGGGTATGATGATGCTATCACCTTTGATTGTCTCACTTCCCTTTAAGTTGGTGGTATTTGTACTCGTGGATGGTTGG
GCAATGACAGTTGGCACCTTATCTGCCAGCTTCGGTTAA

Protein sequence : 
MKNLSAWHRWLPLLVLVSLLFAFPTMAADNGLTILSVSDGDTQQEYSVKLQILLLMTALSFLPAFILMATSFTRIVVVLA
ILRQALGLQQSPPNRVLVGIALALTLLIMRPVWSDIYENAFQPYDNGEITLIQAFSVAEKPVREFMLAQTHQSSLEQMLR
IANEPLDQNVEDISFAVVLPAFVISELKTAFQIGFMLFIPFLVIDLVVASVLMAMGMMMLSPLIVSLPFKLVVFVLVDGW
AMTVGTLSASFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 1e-31 42
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 1e-31 42
escR AAK26700.1 EscR Virulence LEE Protein 1e-31 42
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 1e-31 42
escR AAL57527.1 EscR Virulence LEE Protein 1e-31 42
escR CAC81847.1 EscR protein Virulence LEE II Protein 1e-31 42
escR CAI43889.1 EscR protein Virulence LEE Protein 1e-31 42
escR AAC31528.1 L0049 Virulence LEE Protein 9e-32 42
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 5e-31 42
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 1e-31 42
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 9e-32 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 1e-28 41
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 6e-29 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-29 41
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 5e-29 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 5e-29 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-29 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-29 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 1e-27 41
escR AAC38369.1 EscR Virulence LEE Protein 9e-31 41
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-29 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 3e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_3260 YP_008548138.1 putative flagellar assembly protein VFG1259 Protein 2e-62 61
N646_3260 YP_008548138.1 putative flagellar assembly protein VFG2016 Protein 6e-56 54
N646_3260 YP_008548138.1 putative flagellar assembly protein VFG2338 Protein 4e-50 53
N646_3260 YP_008548138.1 putative flagellar assembly protein VFG2494 Protein 3e-54 52
N646_3260 YP_008548138.1 putative flagellar assembly protein VFG0827 Protein 5e-32 42
N646_3260 YP_008548138.1 putative flagellar assembly protein VFG0044 Protein 2e-30 41
N646_3260 YP_008548138.1 putative flagellar assembly protein VFG0715 Protein 5e-31 41