Gene Information

Name : LY180_08100 (LY180_08100)
Accession : YP_008564728.1
Strain : Escherichia coli LY180
Genome accession: NC_022364
Putative virulence/resistance : Unknown
Product : cold-shock protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1715441 - 1715653 bp
Length : 213 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
TTGTCCCGTAAAATGACAGGAATTGTCAAAACCTTTGACGGCAAAAGCGGCAAGGGTCTTATCACCCCATCCGATGGTCG
TATCGATGTCCAGCTTCATGTTTCAGCGCTCAATCTCCGCGATGCAGAAGAAATTACCACCGGATTACGCGTGGAATTTT
GCCGGATAAATGGTCTGCGTGGCCCTTCAGCTGCCAATGTTTACCTTTCATGA

Protein sequence :
MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 8e-21 75
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 8e-06 45