|
Name : LY180_11460 (LY180_11460) Accession : YP_008565382.1 Strain : Escherichia coli LY180 Genome accession: NC_022364 Putative virulence/resistance : Unknown Product : heme lyase subunit CcmH Function : - COG functional category : - COG ID : - EC number : - Position : 2399037 - 2400089 bp Length : 1053 bp Strand : - Note : cytochrome c-type biogenesis protein; involved in the attachment of heme to cytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAGGTTTTTATTGGGCGTGCTGATGCTGATGATCTCCGGCTCAGCACTGGCGACCATCGACGTGTTGCAGTTTAAAGA TGAAGCACAGGAACAACAGTTCCGTCAGCTCACTGAAGAACTGCGCTGCCCGAAATGCCAGAACAACAGCATTGCCGATT CCAACTCGATGATTGCCACCGACCTGCGTCAGAAAGTGTATGAACTGATGCAGGAAGGTAAAAGTAAAAAAGAGATTGTC GATTATATGGTGGCGCGTTACGGCAACTTCGTCACTTACGATCCGCCGTTAACGCCGCTGACCGTGCTGCTGTGGGTGCT TCCGGTAGTGGCTATTGGCATTGGCGGTTGGGTCATATACGCCCGCTCGCGGCGTCGGGTACGCGTAGTGCCGGAAGCGT TTCCTGAACAAAGCGTGCAGGAAGGTAAGCGTGCCGGATATATTGTTTATCTGCCGGGTATTGTGGTGGCGTTAATTGTG GCTGGCGTCAGCTACTACCAGACTGGCAATTATCAGCAGGTGAAAATCTGGCAGCAGGCCACGGCACAGGCTCCGGCGTT GCTGGACAGGGCGCTGGATCCGAAAGCCGATCCGCTCAACGAAGAAGAGATGTCGCGTCTTGCGCTGGGGATGCGTACTC AACTGCAAAAAAATCCGGGAGATATAGAAGGCTGGATTATGTTGGGCCGCGTTGGCATGGCGCTGGGTAACGCTAGTATC GCCACCGATGCATACGCTACTGCGTATCGCCTCGATCCGAAAAACAGCGATGCCGCACTGGGTTATGCTGAAGCGTTGAC ACGTTCATCTGATCCCAACGACAACCGCCTCGGTGGTGAACTGCTGCGCCAGTTGGTGAGAAGCGACCACAGCAATATCC GTGTGTTAAGCATGTATGCGTTTAATGCCTTTGAGCAGCAGCGATTTGGCGAAGCCGTTGCCGCGTGGGAGATGATGTTG AAACTCTTACCTGCCAACGATACTCGCCGTGCGGTGATTGAACGAAGTATCGCGCAGGCGATGCAACATTTGTCGCCGCA GGAGAGTAAATAA Protein sequence : MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIV DYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIYARSRRRVRVVPEAFPEQSVQEGKRAGYIVYLPGIVVALIV AGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIEGWIMLGRVGMALGNASI ATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNRLGGELLRQLVRSDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMML KLLPANDTRRAVIERSIAQAMQHLSPQESK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmH | YP_217239.1 | heme lyase subunit, cytochrome c-type biogenesis | Not tested | SPI-12 | Protein | 3e-108 | 75 |
