Gene Information

Name : DGI_2703 (DGI_2703)
Accession : YP_008591604.1
Strain : Desulfovibrio gigas ATCC 19364
Genome accession: NC_022444
Putative virulence/resistance : Virulence
Product : putative ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2842895 - 2845516 bp
Length : 2622 bp
Strand : -
Note : -

DNA sequence :
ATGGATTTGAACACCTTCACGCAAAAGTCTCAGGCTGTCCTGGCTGCAGCCCAGCAGGAGGCCGTGCGTCGCGGCCAGCA
ACAGGTGGATGTGGAGCATCTGCTCCATGCCCTGGCCACCCAGGAACAGGGGCTGGTGCCCCGGCTGCTGGAAAAGGCCG
GGTTCGACCCTGCTGCCTACGTTGCCGCCGTGGAGGCGGAACTGAAGAAGCTGCCCAGCGTCTCCGGTCCCGGGGCGCAG
CCGGGGCAGATTGGCATCACCGGCCGCTGCTCGCAGGTGCTGGTCAGGGCGCAGGACATCGCCAAGCGCATGCAGGACGA
GTTCGTCAGTGTGGAGCATCTGTTCCTGGCCGTCCTGGAAGAAGGCCCCAATACCGGGGCCGGCCGCGTGCACAGGCAGT
TCGCGCTGACGCCGGACAAGATCCTGGCCGTGCTCACCCAGGTGCGCGGCAACCAGCGTGTCACCTCGGACAACCCGGAA
GCCTCCTACGAGGCCCTGTCCAAGTATGGCCGCGATCTGGTGGAAGATGCCCGCAAGGGCAAGCTGGACCCGGTGATCGG
CCGCGACGAGGAGATTCGCCGCTGCGTGCGCATCCTTTCCCGTCGCACCAAGAACAACCCCGTGCTCATCGGGGAGGCCG
GCGTGGGCAAGACGGCCATCGTGGAAGGTCTGGCCCACCGCATCCTCAAGGGCGACGTGCCCGAGGGGCTGAAGGACAAG
ACGCTCTTTGCCCTGGACATGGGCGCGCTCATCGCCGGAGCCAAGTACCGTGGCGAGTTCGAAGAGCGGCTCAAGGCCGT
GCTCAAGGAAGTGGAGCAGAGCCAGGGGCGCATCATTCTGTTCATCGACGAGCTGCACACCATCGTCGGCGCGGGCAAGG
CCGAGGGCGCCATGGACGCCGGCAACCTGCTCAAGCCCATGCTCGCCCGCGGGGAGTTGCACTGCATCGGCGCCACCACC
CTGGACGAGTACCGCAAGCACATCGAAAAGGATCCCGCCCTGGAACGCCGCTTCCAGCCCGTGGTGGTGGATGAGCCGTC
GGTGGAGGACGCCATCTCCATCCTGCGCGGCCTGCGGGAACGCTTCGAGGTGCACCACGGCGTGCGCATTGCCGACGCCT
CCCTGGTGGAAGCCGCGGTGCTCTCGCATCGCTACATCACCGACCGCAACCTGCCGGACAAGGCCATCGATCTCATCGAC
GAAGCCGGGGCCATGATCCGCACGGAAATCGACTCCCTGCCCACGGAGCTGGACGCCATCAACCGCAAGATCATGCAGTT
GGAGATCGAGCGCGAGGCCCTGCGCCGCGAAAAGGACGACGCCTCCCGTGACCGGCTGGGCAAGCTGGAAAAGGAACTGG
CCGATCTCAAGGAAGACCAGACCGCCCTGATGACCCGTTGGGAGCACGAAAAGAGCGGCATCAACGACGTCCGCGGCGTC
AAGGAGCAGATCGAAAAGACCCGCCGGGACATCGAGGAAGCCGAGCGCGTGTACGATCTCAACCGCGCCGCGGAACTCAA
GTATTCCGTGTTGTTGAACCTGGAAAAGCAGCTCGCCCAGGCCGAGGGCAGAACCGGCGCGACCGAAGGCGCCTCCCGCC
TGCTCAAGGAGGAGGTGACGCCGGACGACATCGCGTCCATCGTCGCCCGCTGGACGGGCATTCCCGTGTCCCGACTGTTG
GAAGGCGAGCGCGAGAAGCTTTTGCGCCTGCCCGACGAGCTGCACGAACGGGTGATCGGCCAGGACGAAGCCGTGCAGGC
CGTGGCGGACGCCGTGCTGCGCGCCCGGGCCGGACTCAAGGACCCGCATCGCCCCATCGGTTCCTTCCTCTTCCTGGGAC
CCACGGGCGTGGGCAAGACGGAACTCTGCAAGACCCTGGCTGAGGCCCTCTTCGACACCGAAGACAACATGGTGCGCCTG
GACATGAGCGAGTACATGGAAAAGCACACCGTGGCCCGGCTCATCGGTGCGCCCCCTGGGTACATCGGTTATGAGGAAGG
CGGCCAGCTCACGGAGGCCGTGCGCCGCAAGCCGTATTCCGTGGTGCTCTTCGACGAAATCGAAAAGGCGCATCACGACG
TGTTCAACACGCTCCTGCAGATCCTGGACGACGGCCGCCTGACGGACAGCCAGGGCCGCACCGTGGACTTCAAGAACACC
ATCATCATCATGACGTCCAACATCGGCGCGCACCGCATGCTGGAGGGCATCGACGCCGTCGGGCAGTATCGCGAAGGCGT
GCGCGAGGGCGTGCTGGGCGAGCTGCGCGGGCACTTCCGGCCGGAGTTTCTGAATCGCATCGACGAAATCGTGCTCTTCA
AGCCGTTGCTGAAGGCCCAGATCAAGCGCATCATCGATCTGCAGCTCGGAGGCCTCAGGCGGCGGCTGGAGGATCGCAAG
ATCGCCATTGCCATGGACGAGGCGGCCAGGGATCTCATTGCCGATGCCGCCTACGACCCCATCTACGGCGCGCGGCCCCT
CAAGCGCTTCCTCACCCAGCATGTGGAAACGCCCCTGGCCCGGGAACTCATCATGGGCAAGTGGAAGGACGGGGACCAGA
TTGACATCACGACGGCCGAAGACAAGCTCGTCTTCACCCACAAGGCCGAAGTCGTCGAATAG

Protein sequence :
MDLNTFTQKSQAVLAAAQQEAVRRGQQQVDVEHLLHALATQEQGLVPRLLEKAGFDPAAYVAAVEAELKKLPSVSGPGAQ
PGQIGITGRCSQVLVRAQDIAKRMQDEFVSVEHLFLAVLEEGPNTGAGRVHRQFALTPDKILAVLTQVRGNQRVTSDNPE
ASYEALSKYGRDLVEDARKGKLDPVIGRDEEIRRCVRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILKGDVPEGLKDK
TLFALDMGALIAGAKYRGEFEERLKAVLKEVEQSQGRIILFIDELHTIVGAGKAEGAMDAGNLLKPMLARGELHCIGATT
LDEYRKHIEKDPALERRFQPVVVDEPSVEDAISILRGLRERFEVHHGVRIADASLVEAAVLSHRYITDRNLPDKAIDLID
EAGAMIRTEIDSLPTELDAINRKIMQLEIEREALRREKDDASRDRLGKLEKELADLKEDQTALMTRWEHEKSGINDVRGV
KEQIEKTRRDIEEAERVYDLNRAAELKYSVLLNLEKQLAQAEGRTGATEGASRLLKEEVTPDDIASIVARWTGIPVSRLL
EGEREKLLRLPDELHERVIGQDEAVQAVADAVLRARAGLKDPHRPIGSFLFLGPTGVGKTELCKTLAEALFDTEDNMVRL
DMSEYMEKHTVARLIGAPPGYIGYEEGGQLTEAVRRKPYSVVLFDEIEKAHHDVFNTLLQILDDGRLTDSQGRTVDFKNT
IIIMTSNIGAHRMLEGIDAVGQYREGVREGVLGELRGHFRPEFLNRIDEIVLFKPLLKAQIKRIIDLQLGGLRRRLEDRK
IAIAMDEAARDLIADAAYDPIYGARPLKRFLTQHVETPLARELIMGKWKDGDQIDITTAEDKLVFTHKAEVVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-99 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-99 42
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-103 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGI_2703 YP_008591604.1 putative ATP-dependent chaperone ClpB VFG2076 Protein 2e-117 46
DGI_2703 YP_008591604.1 putative ATP-dependent chaperone ClpB VFG2084 Protein 1e-107 41