Name : CMM_0087 (CMM_0087) Accession : YP_001220826.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Unknown Product : TetR family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG1309 EC number : - Position : 128542 - 129288 bp Length : 747 bp Strand : + Note : putative transcriptional regulator, TetR family (ZP_00120758.1| COG1309: Transcriptional regulator [Bifidobacterium longum DJO10A]; NP_793102.1| transcriptional regulator, TetR family [Pseudomonas syringae pv. tomato str. DC3000]). pfam00440, TetR_N,Bacte DNA sequence : ATGCCCACCAGTCCTAGAACGCGCGGACCGTACCGCAAGGGTGTGGAGCGCCGCCGCGAGATCGTCGCGGCGGCGGCTCA GCTGTTCAGCGAATCCGGGTACACGCACGCTTCCATGCGCGAGCTTGCAAAGCGTGTCGGGCTGTCCCAGGCGCTGCTGC TGCACTACTTCTCAGACAAGGAGGACCTGCTCGTCGAGGTGCTGAACCTCCGCGACGCGTCGGTCGCCGAGTACCTCGCC GACATCGCCGACAGCGACATCGCGACGCGCTCTCGGAAGGTCGCTCGCCACGCGGCGGAGCACGAGGGCCTGACATCGCT GTACATCGCTCTGTCTGCCGAAGCCATCGACCCGGAGCACCCTGCGCACGAGTACTTCGCCGACCACTACCGGTCTGCGC AAGAGCAGACACGGGAGCCCGGCGCTGACGCGGGCGTCGTACCCGCGGGCGTAAGCCCTGAGTTGGTGACGGCGTTGGGC ATCGCGGTTATGGACGGGCTGCAGGTGCAGCGTCAGTACCGTCCCGATGTGGATCCGGTCGCTGCCGTGGACGCGTTCTG GGAACTCGTCGCCGCCGCTCGATCCTGGTGGTCACTCACGGCGCAGGACCCGGAGATCGCTGCAGGAGCAGCACCCGTGC CGCTCATCACTGAGCATGCCGAGGTCGATGCGAGCGCTCAGGGTGGTACTGAGGATGCTGTCCTCCAAGGTGCTCCCGGT CCCGACGGCGCCACTTCGCCCTCCTAA Protein sequence : MPTSPRTRGPYRKGVERRREIVAAAAQLFSESGYTHASMRELAKRVGLSQALLLHYFSDKEDLLVEVLNLRDASVAEYLA DIADSDIATRSRKVARHAAEHEGLTSLYIALSAEAIDPEHPAHEYFADHYRSAQEQTREPGADAGVVPAGVSPELVTALG IAVMDGLQVQRQYRPDVDPVAAVDAFWELVAAARSWWSLTAQDPEIAAGAAPVPLITEHAEVDASAQGGTEDAVLQGAPG PDGATSPS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
CMM_0087 | YP_001220826.1 | TetR family transcriptional regulator | Not tested | chp/tomA region | Protein | 8e-110 | 100 |