Gene Information

Name : CMM_0087 (CMM_0087)
Accession : YP_001220826.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Unknown
Product : TetR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1309
EC number : -
Position : 128542 - 129288 bp
Length : 747 bp
Strand : +
Note : putative transcriptional regulator, TetR family (ZP_00120758.1| COG1309: Transcriptional regulator [Bifidobacterium longum DJO10A]; NP_793102.1| transcriptional regulator, TetR family [Pseudomonas syringae pv. tomato str. DC3000]). pfam00440, TetR_N,Bacte

DNA sequence :
ATGCCCACCAGTCCTAGAACGCGCGGACCGTACCGCAAGGGTGTGGAGCGCCGCCGCGAGATCGTCGCGGCGGCGGCTCA
GCTGTTCAGCGAATCCGGGTACACGCACGCTTCCATGCGCGAGCTTGCAAAGCGTGTCGGGCTGTCCCAGGCGCTGCTGC
TGCACTACTTCTCAGACAAGGAGGACCTGCTCGTCGAGGTGCTGAACCTCCGCGACGCGTCGGTCGCCGAGTACCTCGCC
GACATCGCCGACAGCGACATCGCGACGCGCTCTCGGAAGGTCGCTCGCCACGCGGCGGAGCACGAGGGCCTGACATCGCT
GTACATCGCTCTGTCTGCCGAAGCCATCGACCCGGAGCACCCTGCGCACGAGTACTTCGCCGACCACTACCGGTCTGCGC
AAGAGCAGACACGGGAGCCCGGCGCTGACGCGGGCGTCGTACCCGCGGGCGTAAGCCCTGAGTTGGTGACGGCGTTGGGC
ATCGCGGTTATGGACGGGCTGCAGGTGCAGCGTCAGTACCGTCCCGATGTGGATCCGGTCGCTGCCGTGGACGCGTTCTG
GGAACTCGTCGCCGCCGCTCGATCCTGGTGGTCACTCACGGCGCAGGACCCGGAGATCGCTGCAGGAGCAGCACCCGTGC
CGCTCATCACTGAGCATGCCGAGGTCGATGCGAGCGCTCAGGGTGGTACTGAGGATGCTGTCCTCCAAGGTGCTCCCGGT
CCCGACGGCGCCACTTCGCCCTCCTAA

Protein sequence :
MPTSPRTRGPYRKGVERRREIVAAAAQLFSESGYTHASMRELAKRVGLSQALLLHYFSDKEDLLVEVLNLRDASVAEYLA
DIADSDIATRSRKVARHAAEHEGLTSLYIALSAEAIDPEHPAHEYFADHYRSAQEQTREPGADAGVVPAGVSPELVTALG
IAVMDGLQVQRQYRPDVDPVAAVDAFWELVAAARSWWSLTAQDPEIAAGAAPVPLITEHAEVDASAQGGTEDAVLQGAPG
PDGATSPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0087 YP_001220826.1 TetR family transcriptional regulator Not tested chp/tomA region Protein 8e-110 100