Name : tomA (CMM_0090) Accession : YP_001220829.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Virulence Product : tomatinase, endo-1,4-beta-glycosidase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3693 EC number : - Position : 132170 - 133801 bp Length : 1632 bp Strand : - Note : tomatinase, glycosyl hydrolase, family 10 (ZP_00192175.3| COG3693: Beta-1,4-xylanase [Kineococcus radiotolerans SRS30216]; CAA10112.1| tomatinase [Fusarium oxysporum f. sp. lycopersici]). , pfam00331,Glyco_hydro_10, Glycosyl hydrolase family 10.; High con DNA sequence : ATGAGAACACTGACATCCGCAGCCCTCGCGACCACCGTCGCTCTAGGGCTGACACTGATCGCGGCAGTCCCCGCGAGGGC ATCGACCGGCGATGGACCTACGCTGCGTGAGCTGGCCGAGCCGGCCGGTCTCACGATCGGATCCGGCTCGATCAAGGCCG CGGAGTGGACGAAGGACGACCGCCCGTCGAACTACCTGACCGATCCGCGGTTCGCCGACACCCTCGCCGAACAGTTCAAT GGCCTTTCTCCCGAGAACGAGATGAAATGGGCCTTCACGCAACCCGAAGAGGGTGTGTACGACTTCGCTGGGCTTGACCG ACTGGTCGCCTTCGCCGAAGAGCACGACATGGCGGTAAAGGGCCATGGTCTGATCTCCAGCTGCTGCGATCCGGAGTACG TGACCTCGATCACGGATGCCGGCGAGATGCGGGCGGCGATGACAGAGCACTTCACCACTGTGATGGAGCGTTACGACGGA AGGATCGATCGGTGGGACGTTGTCTCTGAAGCGCTCGAGTCGCAAGGTACGACGCTTCAAAGCACCACCTTCTTTAAGGT CCTCGGTCCCGGGTACATCGCTGACGCCTTCCGCATCGCGCGAGCAGCCGACCCGGACGCGAAGCTCTTCATCAACGAGA ACCTGGTCGAGTTCGATGCGGCGAAGCGGCAGGCGTTCCTCGACCTGCTCACCGGGCTGGTCGCCGAAGGCGTACCCGTC GACGGAGTCGCGCTCCAGATGCACGAGACGTTCGCCGGCCCTCTCCCCGGAGTGATCACCGAGATGGTCGACTCGTACCG TGCGCTTGGTCTTGACGTCGAGATCGCCGAGCTCGATGTGCACACCTACGACCCCGTCTCGCAGGCGACCATCTACGGTG ACGTCGTAGCCGAGGCTCTCGCGGCCGGCGTGACGGAGATCAGCACTTGGGGCTTCACGGACAAGCACCTCTACACCTGG CTCCCGGGAGCCAAGCCACTGATCTTCGACGAGGAGTACGGCCCCAAGCCCGCCTACTTCGCCGTTCGCGACGCACTCCA GCAGTTCGTCACGCCCACCGCTGCCCCCGGCGTGGCCAGCCTCTCCAACACGGGCCGAAAGTCCGGGCTGAGCGACGGTG ATTACGACATCAAGATGAACCTCACCAAGGGCGCGCCGGGCAGCTACTACCGCCTCTACGAGAACGATGTCCTCGTGTCC TCGCAGCGCCTCGACTCCCTCGCGACCCCGCGGCAGTCGGCGACTACGTCCTTCTCCGGGAAGGCGGAGGGGAAGTACAG GTACCGCGCGGAGCTCATCAACTCACAGGGCGTCACGTCGACGAAGACCACCACGGTGCTGGTGAAGCACCTCGCACCCA GCAGACCGGTGGTCTCGGTCGACAACAGGGACGGAGACGGCACCTTCGTCGCCACGGCGACGCTGAAGTCAGGGATCAAC GCCACCTCCTACGCCTTCAAGCTGGACGGCCGGATCGTCGGGACGGGGCCCCTGACGGCTGCGACGCCCAACAAGCAGAC TGCGAAGGTGTCCCTCACCGGAATCGCCGCTGGTCGGCACGCTCTCACCGCCGTTTTCACCAATACGAAGGGATCCACCG AGTCGAGGTCGGTCACCGTCAGGGTGCGCTAG Protein sequence : MRTLTSAALATTVALGLTLIAAVPARASTGDGPTLRELAEPAGLTIGSGSIKAAEWTKDDRPSNYLTDPRFADTLAEQFN GLSPENEMKWAFTQPEEGVYDFAGLDRLVAFAEEHDMAVKGHGLISSCCDPEYVTSITDAGEMRAAMTEHFTTVMERYDG RIDRWDVVSEALESQGTTLQSTTFFKVLGPGYIADAFRIARAADPDAKLFINENLVEFDAAKRQAFLDLLTGLVAEGVPV DGVALQMHETFAGPLPGVITEMVDSYRALGLDVEIAELDVHTYDPVSQATIYGDVVAEALAAGVTEISTWGFTDKHLYTW LPGAKPLIFDEEYGPKPAYFAVRDALQQFVTPTAAPGVASLSNTGRKSGLSDGDYDIKMNLTKGAPGSYYRLYENDVLVS SQRLDSLATPRQSATTSFSGKAEGKYRYRAELINSQGVTSTKTTTVLVKHLAPSRPVVSVDNRDGDGTFVATATLKSGIN ATSYAFKLDGRIVGTGPLTAATPNKQTAKVSLTGIAAGRHALTAVFTNTKGSTESRSVTVRVR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tomA | YP_001220829.1 | tomatinase, endo-1,4-beta-glycosidase | Not tested | chp/tomA region | Protein | 0.0 | 100 |
tomA | AAW49296.1 | putative tomatinase | Virulence | Not named | Protein | 5e-144 | 60 |