Gene Information

Name : hpaE (TSC_c10440)
Accession : YP_004202215.1
Strain : Thermus scotoductus SA-01
Genome accession: NC_014974
Putative virulence/resistance : Virulence
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.60
Position : 987993 - 989543 bp
Length : 1551 bp
Strand : +
Note : -

DNA sequence :
ATGAGGTACCCGGACCAGGTGGCAGGGATTCCCTGGGAACGGATCGAGGCCATTCGAAACGCCCTAAAGGGGTGGACGGC
CCTCCACTTCATCGGCGGGGAGTTCCGCCCCTCGGAAAGCGGGGAGGTCTTCCCCACCTTGGATCCTTCCACCAACGAGG
TGCTCTCCCATGCGGCCCGGGGCGGGGAGAGAGAAGTGGACCGGGCGGCCAAGGCGGCCCACGAGGCCTTCCAGCGGTGG
AGCCGCACCCCGGCCCGGGAGAGGAAGCGCTACCTCCTGAGGATCGCCGAGCTTTTGGAAAAGCATGCGGATGAGCTGGC
GGTGGTGGAGGCCTTGGATGCCGGGCAGGTGCTGCGGATTGTCAAGGCCCAGGTGGCCCGCTCCGCGGAGAACTTCGCCT
TCTACGCCGAGTACGCCGAGCACGCCATGGAGGACCGCACCTTCCCCGTGGACCGGGACTGGCTTTACTACAGCCTGAGG
GTCCCGGCTGGGCCGGTGGGCATCATCACTCCCTGGAACGCTCCCCTGATGCTTTCCACCTGGCGCATCGCCCCGGCCCT
GGCCTTCGGGGACACGGTGGTCCTGAAGCCCGCGGAGTGGAGCCCCTTAACCGCCAGCAAGCTGGCGGAGATCGTGCAGG
AGGCGGACCTTCCCCCTGGGGTCTTCAACCTGGTCCAGGGCTACGGCGAGGAGGCGGGGGCTGCCCTGGTGGCCCATCCC
CTCGTTCCCCTCATCACCCTCACCGGGGAGACGGAAACCGGGAAGATCGTCATGCAAAACGCCGCCCGCCACCTTAAGCG
GCTCTCCCTGGAGCTTGGCGGGAAAAGCCCGGCCTTGGTCTTTGCTGACGCCGATTTGGAAAGGGCTTTGGACGCGGTGC
TCTTCCAGATCTACTCCTTCAACGGGGAGCGGTGCACAGCGAGCTCCCGCCTCCTGGTGGAGGAGTCCATCTTTGAAACC
TTTGTGGAGAGGGTGGCGGAACGGGCGCGGGCCATCCGGGTGGGCCATCCCCTGGACCCCGAGACCGAGGTGGGCCCCCT
CATCCACCCCGAGCACCTGGAGAGGGTTTTGGGGTATGTGGAGGCGGGCCTTAAGGAGGGGGCAAGGCTTCTCGTGGGCG
GGAAGAGGGCCACCACCTCCTTCCGCGGGGAGGATCTTTCCCAGGGGAACTACCTGGAGCCCACCCTCTTCGTGGGGGAA
AACCACATGAAAATCGCCCAGGAGGAGATCTTCGGGCCCGTCTTGGTGGCCATTCCTTTCAAGGACGAGGAGGAAGCCCT
TAGGAAGGCCAACGACACCCGGTATGGCCTTGCGGCCTACGTGTTCACCCGGGACTTGGAAAGGGCCCATCGCCTGGCCC
TGGAGCTAGAGGCGGGCCTCGTTTACCTGAACAGCCACAACGTGCGCCACCTGCCCACCCCCTTTGGCGGGGTGAAGGCC
AGCGGGGAGCGGCGGGAGGGTGGCCTTTATGCTCTTGAGTTTTACACCGACCTCAAGGCCGTGGGGCTTCCCCTGAGGCC
CCCCCACGTGCCCAAGTTCGGAAAGAGGTGA

Protein sequence :
MRYPDQVAGIPWERIEAIRNALKGWTALHFIGGEFRPSESGEVFPTLDPSTNEVLSHAARGGEREVDRAAKAAHEAFQRW
SRTPARERKRYLLRIAELLEKHADELAVVEALDAGQVLRIVKAQVARSAENFAFYAEYAEHAMEDRTFPVDRDWLYYSLR
VPAGPVGIITPWNAPLMLSTWRIAPALAFGDTVVLKPAEWSPLTASKLAEIVQEADLPPGVFNLVQGYGEEAGAALVAHP
LVPLITLTGETETGKIVMQNAARHLKRLSLELGGKSPALVFADADLERALDAVLFQIYSFNGERCTASSRLLVEESIFET
FVERVAERARAIRVGHPLDPETEVGPLIHPEHLERVLGYVEAGLKEGARLLVGGKRATTSFRGEDLSQGNYLEPTLFVGE
NHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTRYGLAAYVFTRDLERAHRLALELEAGLVYLNSHNVRHLPTPFGGVKA
SGERREGGLYALEFYTDLKAVGLPLRPPHVPKFGKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 8e-93 48
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-67 44
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-63 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-65 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-65 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-65 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hpaE YP_004202215.1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase VFG0082 Protein 9e-64 42