Gene Information

Name : STMMW_10381 (STMMW_10381)
Accession : YP_005232096.1
Strain : Salmonella enterica D23580
Genome accession: NC_016854
Putative virulence/resistance : Virulence
Product : prophage protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1109811 - 1110497 bp
Length : 687 bp
Strand : -
Note : pfam_scan;Pfam:PF07108; E()=3.2E-151;score=500.5;query 1-228;description=PipA

DNA sequence : 
ATGCCAACGGGAATTAAACCAATATTTATCAATAATATGATGTCAACATATGGATTATCCCATCCTCATGACAGCAAGGT
ATTTCCAGACCTTCCAGAACACCAAGATAATCCTTCGCAATTACGCCTCCAACATGATGGTCTTGCTACCGATGATAAAG
CCAGGCTGGAACCAATGTGTCTTGCTGAATACCTTATCTCTGGACCAGGAGGAATGGATCCTGATATCGAAATTGATGAT
GATACCTATGATGAATGCCGTGAGGTGCTATCACGCATACTTGAAGATGCATACACTCAAAGCGGGACATTCCGCAGACT
GATGAATTATGCCTACGACCAGGAATTGCATGATGTAGAACAACGCTGGTTGCTGGGAGCCGGAGAAAACTTTGGTACTA
CCGTAACTGATGAGGACCTGGAGAGTTCAGAAGGCAGAAAAGTGATTGCCCTCAACCTGGATGATACAGACGATGATTCA
ATACCAGAGTACTATGAAAGTAATGATGGCCCACAACAATTTGATACAACACGCTCATTTATTCATGAAGTTGTACACGC
GTTGACTCACCTTCAGGACAAAGAAGACAGTAATCCAAGAGGCCCGGTAGTCGAGTATACCAATATCATTTTAAAAGAGA
TGGGTCACACATCACCACCAAGAATCGCCTACGAATTTAGTAATTGA

Protein sequence : 
MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDD
DTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDS
IPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipA NP_460060.1 pathogenicity island-encoded protein A Virulence SPI-5 Protein 2e-63 72
pipA AAC33726.1 PipA Virulence SPI-5 Protein 5e-65 72
pipA YP_216026.1 pathogenicity island encoded protein: SPI3 Virulence SPI-5 Protein 1e-62 71
pipA NP_455585.1 conserved hypothetical protein Virulence SPI-5 Protein 7e-63 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMMW_10381 YP_005232096.1 prophage protein VFG0588 Protein 8e-64 72