Gene Information

Name : A464_1030 (A464_1030)
Accession : YP_008321626.1
Strain : Salmonella bongori N268-08
Genome accession: NC_021870
Putative virulence/resistance : Virulence
Product : Inositol phosphate phosphatase sopB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1059168 - 1060850 bp
Length : 1683 bp
Strand : -
Note : -

DNA sequence :
ATGCAAATACAGAGTTTCTGTCATTCAGTCTCTTTGACAGCCCAGGAGGCATTTAAAAGCCTACAAGCCATTTTCTACAA
TGGGATGCAGATCCTCTCTGGTCAGGGAAACGCACCGCCTAAAGCTCCCGGTGCTCGCCTGGAAATCTTTGTCCTGCGAA
GCTCCGGTGAGACATGGGGAAATTATTTACAGGGGCAGGAGGCGTCCAGCCAGTCGCTACATAACCTCTATGATTTTCAG
CGTGTGCTTCTGACTGTTGCAGCCACCGTTTTGGGTAAACAGGACTCGGTGCTGACGTCAATGGCAAACCACATGGTGTT
AGCGAAAGTTAAAGCGGATCGACCGGCCACAAAACAGGAAGAAACCGCCGCGAAGGAATTGAAAAAAAATCTTATCGCTC
TGATTGCCACACGCTATCAGCAAAATGGCCTGCCTGCACAAGAGGCTCATCAGGTTGCAGTAGCCGCGTTCAGGGAAGCT
CAGGTCCAGTATCTTAATAATCAGCCCTGGCAGACCATAAAAAATACGCTCACGCATAACGGATATCACTATACCAACAC
GCAGTGCCCTGCCGCCGACATGAAAATCGGCGCACAGGATATTTTTCCCAACGCCTATCAGGGAAAAGGCGTATGCAGTA
GTGATACCACGAATACCCAACATGCTACTAACCTATGGATGTCCACGTTAAGCGTTCATGAGAATGGTAAAGATAAAACG
CTTTTTTGCGGGATACGTCATGGCGTTCTCTCTCCCTATCACGTAAAAGACCCGATTCTGCGTCAGGTTGGCGCCGAAAA
CAGAGCCAGAGAAGTGTTAACTGCAGCGCTTTTTAGTCAACCCGCGTTGCTTACAAAAGCCTTACAGGACGAAGTCGTCA
GTCTGCGACTGGTATCTGTCGGATTGCTTACCACCTCGACTATTGTTGGTAATGAAGACGCTATGGTCCAGGATCAAATG
CGCGCGTGGCAATCGTTGACCCAGCAGGGAAATGTGATTCATTTAAATATCCGCAATAAAGAGGGTGAGCTGCGAACGGT
AAAAATAAAGCCGGAGATCGCTGCTTTTAATACGGGTGTCAACGAGCTGACGCTCAAACTTGGCTTAGGACATCAGGCCT
CGGATAACTATAATATCGGGGCATTACATCAGTTATTAGGCCATGACTTACGTCCTGAAGCCCCCCCTGGCGGTTGGGTT
GGTGAATGGCTGGCGCAACATCCGGATAACCACGCTGTCGTAAATACTCTTGTACGGCAGATTAAGGATATCTGGAATAG
CAAGCTTCATCATACAGACGGCAACGAACCCTATAAGTTTGCGCAACGTCTTGCAATACTAGCCCATGAAATCGGCGCGG
TTCCTGCCTGGAATTGCAAAAGCGGTAAAGATCGTACGGGTATGCAGGATGCTGAAATTAAGCGGGAGGTTATCTCTCTC
CATCAGAAGGCTACGCTGACTCCCCTTGCGAGCCTTCCGGATAGTGATGGACAGGAAATTTTTCAAAAAGTATTACTCAA
TAGCGGCAATCTGGAAATTCAAAAACAAAATACAGGCGGGGCGGGAAACAAAGTCTTGAAAAACTTACCGCCAGAAGTGC
TCAATCTTTCTTATCAAAGACGCATTGGGGATACCAATATCTGGCAATTGGTAAAGGGCCTTTCTTCATTAGTCACCTCC
TGA

Protein sequence :
MQIQSFCHSVSLTAQEAFKSLQAIFYNGMQILSGQGNAPPKAPGARLEIFVLRSSGETWGNYLQGQEASSQSLHNLYDFQ
RVLLTVAATVLGKQDSVLTSMANHMVLAKVKADRPATKQEETAAKELKKNLIALIATRYQQNGLPAQEAHQVAVAAFREA
QVQYLNNQPWQTIKNTLTHNGYHYTNTQCPAADMKIGAQDIFPNAYQGKGVCSSDTTNTQHATNLWMSTLSVHENGKDKT
LFCGIRHGVLSPYHVKDPILRQVGAENRAREVLTAALFSQPALLTKALQDEVVSLRLVSVGLLTTSTIVGNEDAMVQDQM
RAWQSLTQQGNVIHLNIRNKEGELRTVKIKPEIAAFNTGVNELTLKLGLGHQASDNYNIGALHQLLGHDLRPEAPPGGWV
GEWLAQHPDNHAVVNTLVRQIKDIWNSKLHHTDGNEPYKFAQRLAILAHEIGAVPAWNCKSGKDRTGMQDAEIKREVISL
HQKATLTPLASLPDSDGQEIFQKVLLNSGNLEIQKQNTGGAGNKVLKNLPPEVLNLSYQRRIGDTNIWQLVKGLSSLVTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopB AAK27357.1 SopB Virulence SPI-5 Protein 0.0 99
sigD NP_455588.1 cell invasion protein Virulence SPI-5 Protein 0.0 78
sopB YP_216030.1 outer protein Virulence SPI-5 Protein 0.0 78
sopB NP_460064.1 secreted effector protein Virulence SPI-5 Protein 0.0 78
sopB AAK27355.1 SopB Virulence SPI-5 Protein 4e-151 77
sopB AAC33723.1 SopB Virulence SPI-5 Protein 0.0 77
sopB AAK27356.1 SopB Virulence SPI-5 Protein 5e-147 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A464_1030 YP_008321626.1 Inositol phosphate phosphatase sopB VFG0465 Protein 0.0 78
A464_1030 YP_008321626.1 Inositol phosphate phosphatase sopB VFG0992 Protein 1e-81 46