Gene Information

Name : REMIM1_CH01074 (REMIM1_CH01074)
Accession : YP_008363846.1
Strain : Rhizobium etli Mim1
Genome accession: NC_021905
Putative virulence/resistance : Virulence
Product : response regulator protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1104902 - 1105585 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGCGAATCCTGCTTATCGAGGACGATATCAAGACGTCCGACTATATCGCCAAGGGCTTCACGGAGGCCGGGCACGTCTG
TGACGTGTTCGGCGACGGCCGCGACGGGTTGTTTCAGGCGCAGCGCGAGGCCTATGACGTCATCGTCGTCGATCGCATGC
TGCCGGGTCTCGATGGGCTGGCGATCATCCGCTCGTTGCGCGCCGCCAAGGTCGGCACGCCGGCGCTGTTCCTGACCTCG
ATCGGCGGCGTCGACGACCGGGTCGAGGGGCTGGAGGCCGGCGGCGACGATTATCTCACCAAACCCTTCGCCTTCTCCGA
GCTTCTGGCGCGCGTCAATGCGCTCGGCCGCCGCCCTCCGGTGCAGGAGCAGCGCACGGTCTTGAAGGTCGCCGATCTCG
AGCTCGATCTGATCCGGCGGGAGGCGCGGCGCGCCGGCCAGGTGATCGAGCTGCAGCCGCGCGAATTCACCCTGCTCGAG
GTGCTGATGCGCGGCGAAGGCCGTGTCATCACCAAAACCATGCTCCTGGAGCGGGTCTGGGATTTCCACTTCGATCCGAA
GACCAGCGTCGTGGAGACCCATATCAGCCGCCTCAGGGCCAAGGTCGACAAGCCGTTCCAGGCCCAGCTTCTGCACACGA
TCCGCAACACCGGATACAGCCTGCATGCGCCTCGAACAGGATGA

Protein sequence : 
MRILLIEDDIKTSDYIAKGFTEAGHVCDVFGDGRDGLFQAQREAYDVIVVDRMLPGLDGLAIIRSLRAAKVGTPALFLTS
IGGVDDRVEGLEAGGDDYLTKPFAFSELLARVNALGRRPPVQEQRTVLKVADLELDLIRREARRAGQVIELQPREFTLLE
VLMRGEGRVITKTMLLERVWDFHFDPKTSVVETHISRLRAKVDKPFQAQLLHTIRNTGYSLHAPRTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-43 47
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-43 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REMIM1_CH01074 YP_008363846.1 response regulator protein BAC0083 Protein 2e-52 51
REMIM1_CH01074 YP_008363846.1 response regulator protein BAC0197 Protein 2e-51 49
REMIM1_CH01074 YP_008363846.1 response regulator protein BAC0638 Protein 8e-47 49
REMIM1_CH01074 YP_008363846.1 response regulator protein BAC0125 Protein 2e-49 47
REMIM1_CH01074 YP_008363846.1 response regulator protein BAC0347 Protein 2e-46 46
REMIM1_CH01074 YP_008363846.1 response regulator protein BAC0111 Protein 8e-51 45
REMIM1_CH01074 YP_008363846.1 response regulator protein BAC0308 Protein 2e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REMIM1_CH01074 YP_008363846.1 response regulator protein VFG0596 Protein 1e-43 47
REMIM1_CH01074 YP_008363846.1 response regulator protein VFG1389 Protein 2e-31 42