Gene Information

Name : tssK-2 (BP1026B_II0109)
Accession : YP_006276790.1
Strain :
Genome accession: NC_017832
Putative virulence/resistance : Unknown
Product : type VI secretion system
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 120967 - 122316 bp
Length : 1350 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTGGCATAACAAAGTGGTGTGGAACGAAGGACTGTTTCTTCTTCCCCAGCTGTTTCAACAACAGGAACGGTATTT
CGAATATTTCGCGCACAAGCGGGCCGCGGTCCTCAGCCCGTTTTTCTGGGGATTCAGCCGATACGAAATCGATCAGGAGT
CGCTATCGTTCGGCAAGCTCGTGTTCAAGAGCGGTGCGGGAATATTTCCCGACGGAACGCCGTTCGACGTGCCGGGGCAC
ACGCCGCCGCCGCCGCCGCTGACGATTGCCGCCGAGCATCAGGATCAGGTGATTTATCTCGCGGTGCCGCTGCGTCTGCC
GAATACGGAGGAGACCGCGTTCGACGAACAAGCGGGATCGCTTGCGCGCTATTCGGCGTTCGAGATCGAATTGCGCGACA
GCAATGCGATCGGTCAAGGGCCCAAGCCGGTACAGCTCGCGAACATGCGGCTGCGCCTGCTGCCGGAAAAGGAGCTGACG
CAGTCCTGGATCGGTATTGCCTTGACGCGCGTGAAGACGCTTCACGCCGACGGCTCGGTCGCGCTGTACGACGGTGACCA
CATCCCGCCCGTCAGCCAGTACGGAGCGAACCCGCTGCTGCGCGAATGGGCGACCCAGTTGCACGGCCTCGCGAAACTGC
GAGCCGACGCGCTGGCGACGCGCCTGTCCGGCAGCGATGGCCGGGCCGGGGCGGCGGCCGAGGTGGCGGATTATTTGTTG
CTGCAGGTGCTGAACCGGTATGAGCCGCTGCTCGAGCACATCTGCAGGATTCGCGAAATGCCGCCCGTCACGCTCTATCG
CGAGCTGTCGATGCTGGCAGGCGAATTGTCGACGTTCGTGCGCCCGCAAACGCGCCGTCCGCGGCCGACGCCCGGTTACG
ATCATGCGCAGTTGTATGCGAGCATTCGCCCGCTGGTCGACGAGGTGCACTACCTGTTGAACCAGGTTCTGATTCGAGGC
GCGCAGCCGATCCCGCTCACCGAGCAGCCGCACGGCATTCGCGTGGCCACGATGTTGCCGTCGGAACTCGCGGGCTATTC
GAGCCTCGTGCTCGCCGTGGGCGCGCAAATGTCGCCGGACGTGTTGCAGCAGCAGTTCGCATCCCAAACGAAGATCAGCC
ATCCGCAGCGGCTGCCGGAGCTCATTCGCTCTCATTTGCCGGGCATGACGATGATTCCGTTGCCGGTGCCTCCGCGGCAG
ATTCCGTTCAATTCCAGCTATATCTATTACGAGCTATCCCGCACGGGGCCGTTCTGGGAACAGATTGCGCAACAAGGCGG
GCTGGCGATGCACATCGCGGGCCACTTCCCTGAACTCAAGCTCGAACTTTGGGGAGTGCGTCACAAATGA

Protein sequence :
MSWHNKVVWNEGLFLLPQLFQQQERYFEYFAHKRAAVLSPFFWGFSRYEIDQESLSFGKLVFKSGAGIFPDGTPFDVPGH
TPPPPPLTIAAEHQDQVIYLAVPLRLPNTEETAFDEQAGSLARYSAFEIELRDSNAIGQGPKPVQLANMRLRLLPEKELT
QSWIGIALTRVKTLHADGSVALYDGDHIPPVSQYGANPLLREWATQLHGLAKLRADALATRLSGSDGRAGAAAEVADYLL
LQVLNRYEPLLEHICRIREMPPVTLYRELSMLAGELSTFVRPQTRRPRPTPGYDHAQLYASIRPLVDEVHYLLNQVLIRG
AQPIPLTEQPHGIRVATMLPSELAGYSSLVLAVGAQMSPDVLQQQFASQTKISHPQRLPELIRSHLPGMTMIPLPVPPRQ
IPFNSSYIYYELSRTGPFWEQIAQQGGLAMHIAGHFPELKLELWGVRHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0304 NP_454884.1 conserved hypothetical protein Not tested SPI-6 Protein 5e-117 58