Gene Information

Name : pipA (STM1087)
Accession : NP_460060.1
Strain : Salmonella enterica LT2
Genome accession: NC_003197
Putative virulence/resistance : Virulence
Product : pathogenicity island-encoded protein A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1175548 - 1176228 bp
Length : 681 bp
Strand : -
Note : similar to Gifsy prophage protein GtgA; GogA (STM1026)

DNA sequence :
ATGCTTCCGGTCACCTACAGATTAATACCTCAAAGCGGAGTATCCACATATAGATTAAATACCGCAGATACACCTGTTTT
CCCCGATATTCCCGAACATGCACCAAACCCCTCACGGCTACGCCTTGCTCATGACAGCCTTGCCATAAACAGTGAATTCC
GTCTGGAGCCAGAGTGTGTGGTGGAGTACCTTATCTCAGGCGCGGGTGGAATAGACCCTGATACAGAAATTGATGACGAC
ACTTATGACGAATGCTACGATGAACTATCCTCCGTACTTCAAAATGCGTATACCCAAAGCGAAACATTCCGCAGACTGAT
GAATTACGCATATGAAAAAGAACTACATGATGTGGAGCAGCGCTGGCTACTGGGGGCAGGCGAAGCCTTTGAAACTACCG
TGGCTCAGGAACACTTCAAACTTTCAGAAGGCAGGAAAGTTATTTGTCTCAATCTGGACGATTCTGATGATTCATATACC
GAACATTATGAAAGTAACGAAGGAAGACAACTTTTTGACACAAAACGTTCATTTATTCATGAAGTTGTACATGCCCTGAC
CCATCTTCAGGATAAAGAAGAAAATCATCCAAGAGGCCCTGTTGTCGAATATACCAACATTATTCTGAAAGAGATGGGGC
ATCCTTCACCTCCCAGAATGGTCTACATCTTCAATAAATAG

Protein sequence :
MLPVTYRLIPQSGVSTYRLNTADTPVFPDIPEHAPNPSRLRLAHDSLAINSEFRLEPECVVEYLISGAGGIDPDTEIDDD
TYDECYDELSSVLQNAYTQSETFRRLMNYAYEKELHDVEQRWLLGAGEAFETTVAQEHFKLSEGRKVICLNLDDSDDSYT
EHYESNEGRQLFDTKRSFIHEVVHALTHLQDKEENHPRGPVVEYTNIILKEMGHPSPPRMVYIFNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipA NP_460060.1 pathogenicity island-encoded protein A Virulence SPI-5 Protein 3e-94 100
pipA NP_455585.1 conserved hypothetical protein Virulence SPI-5 Protein 4e-92 99
pipA YP_216026.1 pathogenicity island encoded protein: SPI3 Virulence SPI-5 Protein 3e-93 99
pipA AAC33726.1 PipA Virulence SPI-5 Protein 9e-92 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pipA NP_460060.1 pathogenicity island-encoded protein A VFG0588 Protein 1e-94 100