Gene Information

Name : irlR2 (AXYL_01121)
Accession : YP_003977180.1
Strain : Achromobacter xylosoxidans A8
Genome accession: NC_014640
Putative virulence/resistance : Virulence
Product : transcriptional activator protein IrlR 2
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1188887 - 1189579 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACTGCTGGTCGTTGAAGACGAGAACAAGACGGCGGATTACGTCCGCCAAGGTCTCATGGAGGCGGGATTCGTAGT
GGATCTGGCGCGCAACGGATTGGACGGACACCACCTGGCCATGGGCGAGACATACGATCTGGTGGTCTTGGATGTCATGC
TGCCGGATGTCGATGGCTGGCGCATCGTGCGTGCCCTTCGAGATGCCGGTAAACAGGTCCCTGTACTCTTTCTGACGGCG
CGTGGCGGTGTGGACGACCGTGTCAAGGGATTGGAACTGGGAGCGGACGACTACCTCGTCAAGCCATTCGCCTTCTCTGA
GTTGCTGGCGCGGGTGCGGACGCTGCTGCGACGCGGAAGCGCTCCGAGCCAGCCTGATCGCATCCAGGTTGCCGATTTGG
TACTGGACTTGGCGCGCCGACGTGCAACGCGCGCTGGCCAACGCATCAATCTCACCAGCAAGGAGTTCGCGTTGCTTGAG
CTCCTGGCCCGTCGCCAGGGGGAAGTCCTTCCACGTTCTCTGATCGCGTCGCAGGTATGGGACATGAATTTCGACAGCGA
CAGCAACGTCATCGATGTAGCCATCCGCCGCCTACGCGCGAAGATAGACGATGCGTTCAATCCGAAGCTCATCCACACCG
TGCGTGGAATGGGATACACGCTCGATGCGCCCGATGATGCCCCTGCGCCATAA

Protein sequence : 
MKLLVVEDENKTADYVRQGLMEAGFVVDLARNGLDGHHLAMGETYDLVVLDVMLPDVDGWRIVRALRDAGKQVPVLFLTA
RGGVDDRVKGLELGADDYLVKPFAFSELLARVRTLLRRGSAPSQPDRIQVADLVLDLARRRATRAGQRINLTSKEFALLE
LLARRQGEVLPRSLIASQVWDMNFDSDSNVIDVAIRRLRAKIDDAFNPKLIHTVRGMGYTLDAPDDAPAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-54 57
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-53 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 BAC0083 Protein 9e-69 71
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 BAC0111 Protein 6e-72 70
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 BAC0638 Protein 2e-60 67
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 BAC0347 Protein 1e-62 65
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 BAC0197 Protein 8e-61 63
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 BAC0308 Protein 1e-60 61
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 BAC0125 Protein 3e-59 61
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 NC_002516.2.879194.p Protein 3e-27 43
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 BAC0487 Protein 9e-26 41
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 NC_003923.1003417.p0 Protein 8e-30 41
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 NC_013450.8614146.p0 Protein 8e-30 41
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 NC_002951.3238224.p0 Protein 8e-30 41
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 NC_007793.3914065.p0 Protein 8e-30 41
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 NC_002758.1121390.p0 Protein 8e-30 41
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 NC_010079.5776364.p0 Protein 8e-30 41
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 NC_002952.2859858.p0 Protein 8e-30 41
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 NC_007622.3794948.p0 Protein 8e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 VFG0596 Protein 6e-55 57
irlR2 YP_003977180.1 transcriptional activator protein IrlR 2 VFG1390 Protein 4e-38 44