Gene Information

Name : STMDT12_C11090 (STMDT12_C11090)
Accession : YP_005246805.1
Strain : Salmonella enterica T000240
Genome accession: NC_016860
Putative virulence/resistance : Virulence
Product : pathogenicity island-encoded protein A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1173233 - 1173736 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence :
GTGGTGGAGTACCTTATCTCAGGCGCGGGTGGAATAGACCCTGATACAGAAATTGATGACGACACTTATGACGAATGCTA
CGATGAACTATCCTCCGTACTTCAAAATGCGTATACCCAAAGCGAAACATTCCGCAGACTGATGAATTACGCATATGAAA
AAGAACTACATGATGTGGAGCAGCGCTGGCTACTGGGGGCAGGCGAAGCCTTTGAAACTACCGTGGCTCAGGAACACTTC
AAACTTTCAGAAGGCAGGAAAGTTATTTGTCTCAATCTGGACGATTCTGATGATTCATATACCGAACATTATGAAAGTAA
CGAAGGAAGACAACTTTTTGACACAAAACGTTCATTTATTCATGAAGTTGTACATGCCCTGACCCATCTTCAGGATAAAG
AAGAAAATCATCCAAGAGGCCCTGTTGTCGAATATACCAACATTATTCTGAAAGAGATGGGGCATCCTTCACCTCCCAGA
ATGGTCTACATCTTCAATAAATAG

Protein sequence :
MVEYLISGAGGIDPDTEIDDDTYDECYDELSSVLQNAYTQSETFRRLMNYAYEKELHDVEQRWLLGAGEAFETTVAQEHF
KLSEGRKVICLNLDDSDDSYTEHYESNEGRQLFDTKRSFIHEVVHALTHLQDKEENHPRGPVVEYTNIILKEMGHPSPPR
MVYIFNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipA NP_455585.1 conserved hypothetical protein Virulence SPI-5 Protein 7e-64 99
pipA YP_216026.1 pathogenicity island encoded protein: SPI3 Virulence SPI-5 Protein 2e-64 99
pipA NP_460060.1 pathogenicity island-encoded protein A Virulence SPI-5 Protein 5e-65 99
pipA AAC33726.1 PipA Virulence SPI-5 Protein 3e-64 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STMDT12_C11090 YP_005246805.1 pathogenicity island-encoded protein A VFG0588 Protein 1e-65 99