Gene Information

Name : RM11_1154 (RM11_1154)
Accession : YP_006665567.1
Strain : Bartonella quintana RM-11
Genome accession: NC_018533
Putative virulence/resistance : Virulence
Product : trwL6 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1472813 - 1473130 bp
Length : 318 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACAATTAGACAACCTACAATCAAAAAGTAATAATAAAATCATTGCAATTGCTGTAGCTATAACTGTACTTTTTAT
GGCTTATCCTGCGTATGTTCAAGCACAAGCTCTAAATAACGCTAAAACTGTTCTACAAAGCCTGCAGAGTGAACTTACTA
AGAAAATTATACCTATCGCTGCTGCTCTTATGCTTTTATGCTTAGCAATTGGTTATGCAGGACGCTATATCGAAAAAGAT
ACATTCATACGGTGGGCAGTCGGCGTTATCATCGCTGGTTCAGCAACCCAAATCGCTAATATGTTGCTCAATCAATAA

Protein sequence : 
MKQLDNLQSKSNNKIIAIAVAITVLFMAYPAYVQAQALNNAKTVLQSLQSELTKKIIPIAAALMLLCLAIGYAGRYIEKD
TFIRWAVGVIIAGSATQIANMLLNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwL5 CAD42840.1 TrwL5 protein Not tested trw-PAI Protein 3e-17 58
trwL5 YP_001610472.1 TrwL5 protein Virulence Not named Protein 4e-17 58
trwL3 CAD42838.1 TrwL3 protein Not tested trw-PAI Protein 2e-17 58
trwL4 CAD42839.1 TrwL4 protein Not tested trw-PAI Protein 1e-17 58
trwL3 YP_001610470.1 TrwL3 protein Virulence Not named Protein 3e-17 58
trwL4 YP_001610471.1 TrwL4 protein Virulence Not named Protein 2e-17 58
trwL2 CAD42837.1 TrwL2 protein Not tested trw-PAI Protein 4e-17 57
trwL6 YP_001610473.1 TrwL6 protein Virulence Not named Protein 2e-16 57
trwL2 YP_001610469.1 TrwL2 protein Virulence Not named Protein 5e-17 57
trwL6 CAD42841.1 TrwL6 protein Not tested trw-PAI Protein 1e-16 57
trwL1 YP_001610468.1 TrwL1 protein Virulence Not named Protein 2e-16 56
trwL1 CAD42836.1 TrwL1 protein Not tested trw-PAI Protein 2e-16 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RM11_1154 YP_006665567.1 trwL6 protein VFG2256 Protein 8e-22 67
RM11_1154 YP_006665567.1 trwL6 protein VFG2251 Protein 8e-23 64
RM11_1154 YP_006665567.1 trwL6 protein VFG2255 Protein 5e-19 64
RM11_1154 YP_006665567.1 trwL6 protein VFG2250 Protein 3e-19 64
RM11_1154 YP_006665567.1 trwL6 protein VFG2254 Protein 1e-19 62
RM11_1154 YP_006665567.1 trwL6 protein VFG2252 Protein 5e-16 60
RM11_1154 YP_006665567.1 trwL6 protein VFG2253 Protein 7e-18 58