Gene Information

Name : RM11_1157 (RM11_1157)
Accession : YP_006665570.1
Strain : Bartonella quintana RM-11
Genome accession: NC_018533
Putative virulence/resistance : Virulence
Product : trwK protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1474367 - 1476838 bp
Length : 2472 bp
Strand : +
Note : -

DNA sequence :
ATGACGGCTGTTGAAAGCATGAAACGGCTTGCGTCAGAAACACCAGTAAGTTTGTTTATACCCTATTCACACCACATTAC
AGATACGATTATCTCTACCAAAAATGCGGAGTATTTGTCGGTTTGGAAAATTGACGGACGCTCACATCAAAGCGCTTCAG
AAGAGGATATTTTTCGGTGGACTAAAGAGCTAAACAATACCCTGCGTGGTATTGCATCGGCTAATTTATCACTGTGGGCG
CATATCGTACGTCGACGTGTTTATGAATATCCTGATTCAACATTTGATAAAATGTTTTGCTATCAGCTTGATGAAAAGTA
CCGACAAAGTTTTGTTGGTTATAATCTAATGGTCAATGATCTATATTTGACCATTGTGTTCCAACCAGTCACTGATAAGG
TTATGTCGTTTTTTTCCCAGCATGAACGTGAAACGCTTGATCAAAAAAAGATGCGGCAAGAATCATGTATTAAAGCTCTC
AATGATATCAACCGTACCTTAAGTCAATCGTTTAAATCTTATGGTGCGGAACTTCTTGGTGCATATGAAAAAAATGGTCA
CGCTTATTCTTCTGCCCTTGAATTTCTTGCAATGCTTGTCAATGGTGAATACCAGCCTATGCCAATCTGCCATGACCGTT
TTGCTGACTATATGTCTATCAACCGGCCTTTCTTCTCAAAATGGGGAGCACTGGGTGAACTGCGCACAACCACTGGAATG
CGCCGATTTGGAATGATGGAAATTAAGGAATATGACACAACAACCAAACCGGGCCAATTAAATGTTTTACTGGAAAGTGA
TTTCGAATTTGTGTTAACACAGAGCTTTTCTGTACTCTCGCGCCATGCAGCCAAGGATTATTTGCAGCGGCATCAACGGA
ATCTTATCGACGCTCGCGATGTAGCAACAAGTCAAATTGAGCAAATTGACGAAGCACTTAATCAACTTGTAAGTGGGCAT
TTTGTCATGGGTGAGCACCATTGCACATTGACCATCTATGGCGATACAATTCAACAAGTTCGTGACTATATGGCAAAAGC
GAATGCGGATATGCTAGACGTTGCCGTGTTACCAAAACCTGTAGATTTGGCCATAGAAGCTGGCTATTGGGCACAACTTC
CCGGAAATTGGAAATGGCGACCACGTCCCGCACCGATTACGTCACTGAACTTTTTATCATTCTCATCTTTTCATAACTTT
ATGTCAGGCAAACCAACCGGGAATCCATGGGGGCCGGCAGTTACAATTCTTAAAACAATAAGTAAAACACCGCTTTATTT
CAATTTTCATGCCTCTAAACTCGAAGAAGATGCGACAAACAAGCGGTTACTTGGTAATACTGCAATCATTGGACAGTCTG
GTTCTGGTAAAACCGTCCTTCTTGGATTTTTGTTAGCGCAAGCGCAAAAATTCAAACCGACAACTGTCGTTTTTGATAAA
GATCGTGGCATGGAAATTGCCATTCGTGCTATGGGAGGACGGTATCTAACATTCAAACCTGGTAGGCCAAGTAGTTTTAA
TCCGTTCCAACTTCCACCGACACAAGACAACCTAACTTTTCTTAAACAATTTGTTAAAAAATTGGCAGAAGCTGGTGGCG
AAATTACTCATCGCGACGAAGAGGAAATTAATCAAGCTGTCATATCTATTATGAGCAGCAACATTGACCGATCGCTCCGT
CGTTTGTCTTTTCTGCTGCAATTCTTACCCAATCCGCGTTCAAGTCATTATAATGCACACCCATCTGTTCACGCTCGCTT
GGCAAAATGGTGCCAAAATGGTGATTATGGGTGGCTCTTTGATAATCCTCAGGATGCACTTGATCTCTCAACGCATCAAA
TTTACGGCTTTGATATTACAGAATTCTTAGATAATCCAGAGACTCGTACTCCAGTGATAATGTACTTGTTCTATCGTACA
GAAGGGATGATCAGTGGGCAACGGTTTATGTATATCTTTGACGAGTTTTGGAAATCTTTACAAGATCCGTACTTTGAAGA
TTTAGCAAAGAACAAGCAAAAAACTATTCGTAAACAAAACGGTATTTTTGTTTTTGCTACGCAAGAGCCTAGTGATGCGC
TGGAAAGCAATATTGCTAAGACGCTCATTCAACAATGTGCAACCTACATTTTTCTAGCCAATCCCAAAGCGAGTTATGAA
GATTATACTGAAGGCTTCAAACTAACAGATGCTGAATTTGAACTGATCAAAGGACTTGGTGAATTTAGTCGTCAGTTCCT
CATCAAGCAAGGTGATCAGTCTGCGCTTGCAGAGCTTAATCTCGGCAAATTCAATGTCACAACTGATGGAAAAACTATCG
AACGTGACTTTAGTGACGAACTCTTAGTATTATCCGGTACGCCAGATAATGCAGAGTTGGTCGAAACCCTTATCGCTGAA
GTCGGGGAAGATCCAGCGGTATGGTTGCCAGTTTTTTTACAACATATAAAAACTGAGAGGAGAGTAGTATGA

Protein sequence :
MTAVESMKRLASETPVSLFIPYSHHITDTIISTKNAEYLSVWKIDGRSHQSASEEDIFRWTKELNNTLRGIASANLSLWA
HIVRRRVYEYPDSTFDKMFCYQLDEKYRQSFVGYNLMVNDLYLTIVFQPVTDKVMSFFSQHERETLDQKKMRQESCIKAL
NDINRTLSQSFKSYGAELLGAYEKNGHAYSSALEFLAMLVNGEYQPMPICHDRFADYMSINRPFFSKWGALGELRTTTGM
RRFGMMEIKEYDTTTKPGQLNVLLESDFEFVLTQSFSVLSRHAAKDYLQRHQRNLIDARDVATSQIEQIDEALNQLVSGH
FVMGEHHCTLTIYGDTIQQVRDYMAKANADMLDVAVLPKPVDLAIEAGYWAQLPGNWKWRPRPAPITSLNFLSFSSFHNF
MSGKPTGNPWGPAVTILKTISKTPLYFNFHASKLEEDATNKRLLGNTAIIGQSGSGKTVLLGFLLAQAQKFKPTTVVFDK
DRGMEIAIRAMGGRYLTFKPGRPSSFNPFQLPPTQDNLTFLKQFVKKLAEAGGEITHRDEEEINQAVISIMSSNIDRSLR
RLSFLLQFLPNPRSSHYNAHPSVHARLAKWCQNGDYGWLFDNPQDALDLSTHQIYGFDITEFLDNPETRTPVIMYLFYRT
EGMISGQRFMYIFDEFWKSLQDPYFEDLAKNKQKTIRKQNGIFVFATQEPSDALESNIAKTLIQQCATYIFLANPKASYE
DYTEGFKLTDAEFELIKGLGEFSRQFLIKQGDQSALAELNLGKFNVTTDGKTIERDFSDELLVLSGTPDNAELVETLIAE
VGEDPAVWLPVFLQHIKTERRVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwK CAD42844.1 TrwK protein Not tested trw-PAI Protein 0.0 90
trwK YP_001610476.1 TrwK protein Virulence Not named Protein 0.0 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RM11_1157 YP_006665570.1 trwK protein VFG2259 Protein 0.0 93
RM11_1157 YP_006665570.1 trwK protein VFG2233 Protein 2e-126 42
RM11_1157 YP_006665570.1 trwK protein VFG2211 Protein 2e-150 41