Gene Information

Name : DSY1143 (DSY1143)
Accession : YP_517376.1
Strain : Desulfitobacterium hafniense Y51
Genome accession: NC_007907
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1358230 - 1358922 bp
Length : 693 bp
Strand : -
Note : similarity to COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain(Evalue: 8E-64)

DNA sequence : 
GTGGGACTTCCCTTGAACCAATCAATCCTGATTATTGAGGATGAAGAAAAAATTGCCCGCTTTGTGGAACTTGAGCTTGG
TTATGAAGGATATAATGTAACTAAAGCTTTTGATGGCCGGACGGGACTTGAGCTGGCGGAAACCGGCCGGTTTGACTTAA
TCCTGCTTGATGTTATGCTGCCTAAATTAAACGGTACAGAGGTTCTGCGGAGAATCCGCCGGACCTCTGCCGTCCCCATC
ATCATGCTCACAGCCCGGGACAGTGTCATGGACAAGGTTTCCGGTCTGGACAGCGGGGCCAATGATTATATCACCAAACC
CTTTGCCATCGAGGAACTGCTGGCCCGTATCCGCAACGCCCTGAGAAACACGGCCCCCCTATCCTCTACAGAGGTCCTCT
CTGCTTCCGGTCTGGAGCTCGATGCCGACCGCCGTACCGTGACCATGAGGGGCAAGCCCGTTGATTTAACCAAACGGGAA
TTCGATCTCTTGCACTTTCTCCTGAAAAACAAAGGAATCGTCCTCTCCCGGGAATCCCTTCTGGAAAATGTCTGGGGCTT
TGATTTTGCGGGAGACACCAATGCTGTGGACGTCTACATACGCTTTCTCCGCGGAAAAATTGACGAAGTGTTCAATCTTA
AATTTATTCACACCGTCAGAGGAGTAGGATATGTGATTAAAGATGACCAATAA

Protein sequence : 
MGLPLNQSILIIEDEEKIARFVELELGYEGYNVTKAFDGRTGLELAETGRFDLILLDVMLPKLNGTEVLRRIRRTSAVPI
IMLTARDSVMDKVSGLDSGANDYITKPFAIEELLARIRNALRNTAPLSSTEVLSASGLELDADRRTVTMRGKPVDLTKRE
FDLLHFLLKNKGIVLSRESLLENVWGFDFAGDTNAVDVYIRFLRGKIDEVFNLKFIHTVRGVGYVIKDDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-47 48
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-47 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSY1143 YP_517376.1 hypothetical protein HE999704.1.gene1528. Protein 7e-50 51
DSY1143 YP_517376.1 hypothetical protein NC_007622.3794948.p0 Protein 1e-50 50
DSY1143 YP_517376.1 hypothetical protein NC_003923.1003417.p0 Protein 1e-50 50
DSY1143 YP_517376.1 hypothetical protein NC_013450.8614146.p0 Protein 1e-50 50
DSY1143 YP_517376.1 hypothetical protein NC_002951.3238224.p0 Protein 1e-50 50
DSY1143 YP_517376.1 hypothetical protein AE015929.1.gene1106. Protein 2e-46 50
DSY1143 YP_517376.1 hypothetical protein NC_007793.3914065.p0 Protein 1e-50 50
DSY1143 YP_517376.1 hypothetical protein NC_002758.1121390.p0 Protein 1e-50 50
DSY1143 YP_517376.1 hypothetical protein NC_010079.5776364.p0 Protein 1e-50 50
DSY1143 YP_517376.1 hypothetical protein NC_002952.2859858.p0 Protein 1e-50 50
DSY1143 YP_517376.1 hypothetical protein BAC0197 Protein 4e-45 49
DSY1143 YP_517376.1 hypothetical protein BAC0308 Protein 5e-43 46
DSY1143 YP_517376.1 hypothetical protein BAC0125 Protein 1e-44 45
DSY1143 YP_517376.1 hypothetical protein NC_012469.1.7685629. Protein 1e-42 44
DSY1143 YP_517376.1 hypothetical protein BAC0638 Protein 1e-38 44
DSY1143 YP_517376.1 hypothetical protein BAC0111 Protein 9e-42 44
DSY1143 YP_517376.1 hypothetical protein DQ212986.1.gene4.p01 Protein 7e-35 43
DSY1143 YP_517376.1 hypothetical protein BAC0083 Protein 1e-44 42
DSY1143 YP_517376.1 hypothetical protein AF155139.2.orf0.gene Protein 2e-36 42
DSY1143 YP_517376.1 hypothetical protein AE000516.2.gene3505. Protein 5e-31 42
DSY1143 YP_517376.1 hypothetical protein NC_005054.2598277.p0 Protein 1e-36 41
DSY1143 YP_517376.1 hypothetical protein NC_014475.1.orf0.gen Protein 1e-36 41
DSY1143 YP_517376.1 hypothetical protein FJ349556.1.orf0.gene Protein 2e-35 41
DSY1143 YP_517376.1 hypothetical protein BAC0347 Protein 4e-38 41
DSY1143 YP_517376.1 hypothetical protein HE999704.1.gene2815. Protein 1e-38 41
DSY1143 YP_517376.1 hypothetical protein U82965.2.orf14.gene. Protein 5e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DSY1143 YP_517376.1 hypothetical protein VFG0596 Protein 7e-48 48
DSY1143 YP_517376.1 hypothetical protein VFG1389 Protein 3e-40 47
DSY1143 YP_517376.1 hypothetical protein VFG1390 Protein 2e-45 45