Name : CMM_0104 (CMM_0104) Accession : YP_001220843.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Unknown Product : sugar permease Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2211 EC number : - Position : 154629 - 156008 bp Length : 1380 bp Strand : + Note : putative sugar permease (MFS superfamily) (ZP_00229022.1| COG0477: Permeases of the major facilitator superfamily [Kineococcus radiotolerans SRS30216]; CAD47966.1| hypothetical protein [Arthrobacter nicotinovorans]). pfam00083, Sugar_tr, Sugar (and other) DNA sequence : ATGTCCGAAGACGAACGCGGGACCCGGCGGGCCGACTCGCCGCGCAACGCCCTTGTCAACATCTCTCCGCTCACCGACCC GAACATCGAGGCGACGCAGCGCGAAGCCGCGGGAGCGTTCGGCGGCGATCCTGTAGTCACCGGGACGTCCGAGAGCAACG AACCGCCCCGCGTGGGCGCCGGCTTCGTCGCCGTCTACTCCCTGACGTACTTCGGCTTCTTCCTCGTGCTCTTCGTGCCG TCGCTGTTCAGCCTCGCGTACAAGGTGCAGCTCATCGAGCCCGAGGGGAAGGAGGCGGCTCTGGGTCTGATCGTCGGGAT CGGAGCACTCTTCAACCTCATCCTCGGCCCGATCTTCGGCGTGCTCAGCGATGCGACACGACTCCGCTGGGGACGGCGGC GCCCGTTCCTCGTCTTCGGTCTCGGCGTGGCGGCTCTTGCGGCCTGCCTGATCGCGATCGCGCCGTCTGTACCGCTCGTC CTCGCGGGCTGGATCATCGCGCAGGTCGCAGCAAGTGCGATCAGCGCCGCACTCAATCCAACCCTTCCCGAGCGCGTACC GGCTGAACAACGCGGAAAGCTGGGCGCTCTGAGCGGCGTGGCGGCGTCCATCGCCGGCGTGAGCGCGACCCTCGTCGGCA GCCTCCTCACCGGCGATCTCGTCCTCCTCTTCCTGCTGCCGGTGGCTGTGCTGGCCGTCGGAGTCGTGCTGTGGCTGTTC GTCGTCCCGGACGCTCCCGCACCCGCGGGAGCACAACGACCGATCGGGGCAGCGCTGCGTTCCTTGCTCTTCGACCCGCG CAAGCACCCCGACTTCGCCTGGGTATGGATCGGCAAGTTCTGCCTCCAGATAGGGCTCGCGTTCTTCACGACCTACCAGC TGTACTTTCTCCTAGACCGCCTCGGCTTCACCGCAGAAGAAGCAGGCCGGCAGCTGGCCGTCGTCGGTGGGATCTCCCTT CTCGCCACCATGCTCTTTACGATCGCCGGAGGAACGCTCTCAGACCGCCTGCGTCGGCGAAAGCCCTTCATCTACCTCGC CTCGGCCATGATCGCCGCCGGAATGATCACCGCCGCCTTCTCCTCCGACTTCGTCATCTACGCCGTCGCGGGCGCGCTGC TCGCTGCCGGAACCGGGGCTTTCAACTCCGTCGACCTCGCGCTGGCCTCGGATGTGCTTCCTGATAAGGCTGAGAGCGGC AAGTGGATGTCGATCTATCACCTGTCTGGCGCTCTCTCGACGGCTGTGGGGCCGGCCATCGCCCCACTCGTTCTCTCGAC GGGCGCCTCCGGCGCGAACTACACCCTGCTCTTCGTCTCCGGAGGCATCCTCGCCCTTGGATCTGTCATCACGGTGATCA GGGTGCGGGGTGCTCGATGA Protein sequence : MSEDERGTRRADSPRNALVNISPLTDPNIEATQREAAGAFGGDPVVTGTSESNEPPRVGAGFVAVYSLTYFGFFLVLFVP SLFSLAYKVQLIEPEGKEAALGLIVGIGALFNLILGPIFGVLSDATRLRWGRRRPFLVFGLGVAALAACLIAIAPSVPLV LAGWIIAQVAASAISAALNPTLPERVPAEQRGKLGALSGVAASIAGVSATLVGSLLTGDLVLLFLLPVAVLAVGVVLWLF VVPDAPAPAGAQRPIGAALRSLLFDPRKHPDFAWVWIGKFCLQIGLAFFTTYQLYFLLDRLGFTAEEAGRQLAVVGGISL LATMLFTIAGGTLSDRLRRRKPFIYLASAMIAAGMITAAFSSDFVIYAVAGALLAAGTGAFNSVDLALASDVLPDKAESG KWMSIYHLSGALSTAVGPAIAPLVLSTGASGANYTLLFVSGGILALGSVITVIRVRGAR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
CMM_0104 | YP_001220843.1 | sugar permease | Not tested | chp/tomA region | Protein | 7e-144 | 100 |