Gene Information

Name : CMM_0104 (CMM_0104)
Accession : YP_001220843.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Unknown
Product : sugar permease
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2211
EC number : -
Position : 154629 - 156008 bp
Length : 1380 bp
Strand : +
Note : putative sugar permease (MFS superfamily) (ZP_00229022.1| COG0477: Permeases of the major facilitator superfamily [Kineococcus radiotolerans SRS30216]; CAD47966.1| hypothetical protein [Arthrobacter nicotinovorans]). pfam00083, Sugar_tr, Sugar (and other)

DNA sequence :
ATGTCCGAAGACGAACGCGGGACCCGGCGGGCCGACTCGCCGCGCAACGCCCTTGTCAACATCTCTCCGCTCACCGACCC
GAACATCGAGGCGACGCAGCGCGAAGCCGCGGGAGCGTTCGGCGGCGATCCTGTAGTCACCGGGACGTCCGAGAGCAACG
AACCGCCCCGCGTGGGCGCCGGCTTCGTCGCCGTCTACTCCCTGACGTACTTCGGCTTCTTCCTCGTGCTCTTCGTGCCG
TCGCTGTTCAGCCTCGCGTACAAGGTGCAGCTCATCGAGCCCGAGGGGAAGGAGGCGGCTCTGGGTCTGATCGTCGGGAT
CGGAGCACTCTTCAACCTCATCCTCGGCCCGATCTTCGGCGTGCTCAGCGATGCGACACGACTCCGCTGGGGACGGCGGC
GCCCGTTCCTCGTCTTCGGTCTCGGCGTGGCGGCTCTTGCGGCCTGCCTGATCGCGATCGCGCCGTCTGTACCGCTCGTC
CTCGCGGGCTGGATCATCGCGCAGGTCGCAGCAAGTGCGATCAGCGCCGCACTCAATCCAACCCTTCCCGAGCGCGTACC
GGCTGAACAACGCGGAAAGCTGGGCGCTCTGAGCGGCGTGGCGGCGTCCATCGCCGGCGTGAGCGCGACCCTCGTCGGCA
GCCTCCTCACCGGCGATCTCGTCCTCCTCTTCCTGCTGCCGGTGGCTGTGCTGGCCGTCGGAGTCGTGCTGTGGCTGTTC
GTCGTCCCGGACGCTCCCGCACCCGCGGGAGCACAACGACCGATCGGGGCAGCGCTGCGTTCCTTGCTCTTCGACCCGCG
CAAGCACCCCGACTTCGCCTGGGTATGGATCGGCAAGTTCTGCCTCCAGATAGGGCTCGCGTTCTTCACGACCTACCAGC
TGTACTTTCTCCTAGACCGCCTCGGCTTCACCGCAGAAGAAGCAGGCCGGCAGCTGGCCGTCGTCGGTGGGATCTCCCTT
CTCGCCACCATGCTCTTTACGATCGCCGGAGGAACGCTCTCAGACCGCCTGCGTCGGCGAAAGCCCTTCATCTACCTCGC
CTCGGCCATGATCGCCGCCGGAATGATCACCGCCGCCTTCTCCTCCGACTTCGTCATCTACGCCGTCGCGGGCGCGCTGC
TCGCTGCCGGAACCGGGGCTTTCAACTCCGTCGACCTCGCGCTGGCCTCGGATGTGCTTCCTGATAAGGCTGAGAGCGGC
AAGTGGATGTCGATCTATCACCTGTCTGGCGCTCTCTCGACGGCTGTGGGGCCGGCCATCGCCCCACTCGTTCTCTCGAC
GGGCGCCTCCGGCGCGAACTACACCCTGCTCTTCGTCTCCGGAGGCATCCTCGCCCTTGGATCTGTCATCACGGTGATCA
GGGTGCGGGGTGCTCGATGA

Protein sequence :
MSEDERGTRRADSPRNALVNISPLTDPNIEATQREAAGAFGGDPVVTGTSESNEPPRVGAGFVAVYSLTYFGFFLVLFVP
SLFSLAYKVQLIEPEGKEAALGLIVGIGALFNLILGPIFGVLSDATRLRWGRRRPFLVFGLGVAALAACLIAIAPSVPLV
LAGWIIAQVAASAISAALNPTLPERVPAEQRGKLGALSGVAASIAGVSATLVGSLLTGDLVLLFLLPVAVLAVGVVLWLF
VVPDAPAPAGAQRPIGAALRSLLFDPRKHPDFAWVWIGKFCLQIGLAFFTTYQLYFLLDRLGFTAEEAGRQLAVVGGISL
LATMLFTIAGGTLSDRLRRRKPFIYLASAMIAAGMITAAFSSDFVIYAVAGALLAAGTGAFNSVDLALASDVLPDKAESG
KWMSIYHLSGALSTAVGPAIAPLVLSTGASGANYTLLFVSGGILALGSVITVIRVRGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0104 YP_001220843.1 sugar permease Not tested chp/tomA region Protein 7e-144 100