Gene Information

Name : Nwi_1196 (Nwi_1196)
Accession : YP_317810.1
Strain : Nitrobacter winogradskyi Nb-255
Genome accession: NC_007406
Putative virulence/resistance : Virulence
Product : two-component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1303301 - 1304017 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence : 
ATGGTGATGGAAAGACAACCTTTGGACAATTCCAGTAACCAGATGCGCCTGCTGATCATCGAGGACGATCGCGAGTCCGC
GGACTACCTCGTGAAGGCGTTTCGCGAGGTCGGACATATCGCGGAACTCGCCAGAGACGGCGAGGAAGGCCTCTCCTTTG
CCGACGGCGGGGACTACGACGTACTGGTGATCGATCGGATGCTGCCCAAGCGCGACGGGCTTTCCGTGATCGGCTGCCTG
CGCGAGAAAGGCATCCTCACTCCGGTGCTCATTCTCTCTGCGCTCGGCCAGGTCGACGATCGCATCAAGGGCTTGCGCGC
CGGCGGCGACGACTATCTGCCTAAACCGTACTCATTTGCCGAGTTGCTGGCGCGGGTGGAGGTCCTGTCGCGTCGTCATG
GCGGGCGCGCCGAAGAAACGCTCTATCGTGTCGGCGATCTCGAACTGGACCGGCTGTCACGCCGCGTTGCGCGGGGTGGA
GAGGAACTGACGCTTCAGCCGCGTGAGTTTCGCCTGTTGGAGTATCTCATGAAGCATGCGGGTCAGGTCGTGACCCGAAC
CATGCTGCTGGAGAATGTCTGGGATTATCATTTTGATCCGCAGACTAACGTCATCGACGTGCATATCTCGCGGTTGCGTT
CCAAGATCGATAAAGGTTTCGAGCAGCCTCTGCTGCACACCATCCGTGGCGCCGGATACATGGTGCGGAGTGGTTAG

Protein sequence : 
MVMERQPLDNSSNQMRLLIIEDDRESADYLVKAFREVGHIAELARDGEEGLSFADGGDYDVLVIDRMLPKRDGLSVIGCL
REKGILTPVLILSALGQVDDRIKGLRAGGDDYLPKPYSFAELLARVEVLSRRHGGRAEETLYRVGDLELDRLSRRVARGG
EELTLQPREFRLLEYLMKHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIDKGFEQPLLHTIRGAGYMVRSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwi_1196 YP_317810.1 two-component transcriptional regulator BAC0125 Protein 3e-49 48
Nwi_1196 YP_317810.1 two-component transcriptional regulator BAC0083 Protein 4e-45 47
Nwi_1196 YP_317810.1 two-component transcriptional regulator BAC0111 Protein 1e-52 46
Nwi_1196 YP_317810.1 two-component transcriptional regulator BAC0197 Protein 1e-44 46
Nwi_1196 YP_317810.1 two-component transcriptional regulator BAC0308 Protein 8e-44 45
Nwi_1196 YP_317810.1 two-component transcriptional regulator BAC0347 Protein 6e-45 44
Nwi_1196 YP_317810.1 two-component transcriptional regulator BAC0638 Protein 4e-38 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nwi_1196 YP_317810.1 two-component transcriptional regulator VFG1389 Protein 4e-33 45
Nwi_1196 YP_317810.1 two-component transcriptional regulator VFG1390 Protein 2e-37 42
Nwi_1196 YP_317810.1 two-component transcriptional regulator VFG0596 Protein 5e-37 41