Gene Information

Name : CMM_0108 (CMM_0108)
Accession : YP_001220847.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Unknown
Product : putative sugar ABC transporter permease
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1175
EC number : -
Position : 162659 - 163621 bp
Length : 963 bp
Strand : -
Note : putative sugar ABC transporter, permease component (NP_822502.1| putative binding-protein dependent transport protein [Streptomyces avermitilis MA-4680]; ZP_00227865.1| COG1175: ABC-type sugar transport systems,permease components [Kineococcus radiotolera

DNA sequence :
ATGTCATCGCCCACCGCCACCATCGCGCCTCCCCCGCGCCCCACCACGGGGCGACCGCGGCGCCGTCGCCCGCTCCGAGG
AGCGCTGACACCGTGGATGTTCGCCGCACCGGCGATCATCCTGTTCGCCGCGTTCCTCATCATCCCGATCATCTACGCGA
TCTACCTCAGCTTCCGCGGCTTCCGCGTCAGCGCCGGAGGCGCCTTCGGACGCCGCGAGGAGACCTTCATCGGCTTCGAG
AACTACATCACCGCGCTCACAGACACCGAGTTCGTCGCGGGCCTCGGCCGAGTGCTGCTCTACGGAGCCATCTCCATCCC
CAGCGTCCTGGGGCTCGCGCTCCTGTTCGCCCTGCTCTTGGACACTCCCCGCATCCGACTCCAGAGCTTCTCGCGCACCG
CGATCTTCCTCCCCTTCGCCGTCCCCGGCGTGATCGCGAGCCTGCTCTGGGGGTTCCTCTACCTCCCTAGCACCAGCCCT
CTCAGCGACATCTCCCGCGCGCTCGGCGGCGGCGCACTGAACTTCTTCGGCACCCCCACCCTCTACTTCTCCCTCGCGAA
CATCGCGCTGTGGTCCGGGGTCGGCTTCAACATGATCATCATCTACACCTCGCTCCGCGCGATCCCCACCGAGATCTACG
AAGCCGCCCGCATCGACGGCGCGACCGAGCTACAGGTTGCGCTGCGCATCAAGGTGCCCCTCGTCGCCCCCGCGCTCGTG
CTCACGGGCCTGTTCTCCGTCATCGGGACCCTGCAGCTGTACAGCGAACCGCAGACCCTACGGCCGTTCACGCCCCGCAT
CTCCAGCACGTGGGTGCCGCTGATGAAGATCTACCAGGACGCGTTCACCAACGACAACTTGGGCGCCGCCGCGGCCGCGT
CGGTCATCCTCGCCGCCGCGATCCTGGCCTTCTCCCTGCTCGTGCTCCGCTTCTTCCAACGCCGGACCTTCGGAGACGCC
TGA

Protein sequence :
MSSPTATIAPPPRPTTGRPRRRRPLRGALTPWMFAAPAIILFAAFLIIPIIYAIYLSFRGFRVSAGGAFGRREETFIGFE
NYITALTDTEFVAGLGRVLLYGAISIPSVLGLALLFALLLDTPRIRLQSFSRTAIFLPFAVPGVIASLLWGFLYLPSTSP
LSDISRALGGGALNFFGTPTLYFSLANIALWSGVGFNMIIIYTSLRAIPTEIYEAARIDGATELQVALRIKVPLVAPALV
LTGLFSVIGTLQLYSEPQTLRPFTPRISSTWVPLMKIYQDAFTNDNLGAAAAASVILAAAILAFSLLVLRFFQRRTFGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0108 YP_001220847.1 putative sugar ABC transporter permease Not tested chp/tomA region Protein 1e-97 100