Gene Information

Name : CMM_0110 (CMM_0110)
Accession : YP_001220849.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Unknown
Product : xylosidase glycosyl hydrolase family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3507
EC number : -
Position : 165201 - 166802 bp
Length : 1602 bp
Strand : +
Note : putative xylosidase (NP_693008.1| xylosidase; arabinofuranosidase [Oceanobacillus iheyensis HTE831]; XYLB_BUTFI Xylosidase/arabinosidase [Includes: Beta-xylosidase (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase); Alpha-N-arabinofuranosidase (

DNA sequence :
ATGAGCACCTTCCAAAATCCCGTCCTCACGGGGATGAACCCGGATCCGTCCCTCTGCGCCGTGGGGGATGAGTTTTTCCT
CGTCACGTCGTCGTTCGCGTATTGGCCGGGGATTCCCGTGCACCGCAGCCGGGATCTCGTGCACTGGGAGCAGATCGGTC
ATGTCCTTGACCGGCCGGAGCAGATCGATCTGTCCGGGATCGACACGTCCGATGGGATCTGGGCGCCGACCATCCGGCAT
CACGACGGTATCTTCTACGTCGTCTCCACCGTCGCTCGGGATCGCCGAGGCGGCGTGAACTTCGTGACGACGGCCTTGGA
CGCGGCAGGGCCGTGGATGCAGCCGGTCGTCCTGGACGCCGAGGGCATCGACCCATCCCTGTTCTTCGACGATGACGGAC
GGTGCTGGTTTACCGCCTGTCGGGATGCGGAAGACCCCTTCCTCAGAGGGCCTGCTGAGCTATACATCCAGGAGCTCGAC
CTCGAGACCCTGCAGCTGACCGGGCCGCTACACGTGCTCTGGAACGGTGCTGTCGCCGGCGCATGGGCCGAAGCACCACA
CATCTACAAGCGCGATGGCGTGTACTACCTCATCGCAGCTGAGGGAGGGACGGAGCGAAACCACTCGGTGACCGCGGCCC
GATCTGCGACGGTGACGGGCCCATACCGGACGGACCCACGAAGCCCTCTTCTCACGCACCGGCACCTCGGCCCCGAAGCG
GTCTTCCAGAACGTCGGGCACGCCGACATCGTGGAGACCCCAGCGGGGGAGACATGGGCTCTCGTCCTCGCCACCCGTCC
TCTCGACGGGGCGCACACCCTCGGGCGCGAGGTCTTCCTGGTTCCCGCCGAATGGACCGACGACGGCCTGCTGCTGGCAC
CCGGCTTCGGCCATGTCCGAGAGATGGAGCGTGCCCCGATCAGCATGCTCAGCGACGCCCCCACTCCCGACGCCCCTTCT
GTCGAGCGAGAGCTCTTCGAGGGTGCAGGACTTCCGCCCGGGTGGCGAAGCCTGCGGGGTCCTGTTCGCGGGCAAGAGCA
GGCCTGCGGTGCCGGAGTGTCCCTGAGGGCGTCGTCCGACGATCTCTCGGACCGCGGCACGCCCTCGTTCCTGGCGCGCA
GGCAAGAGCACCAGAGCTTCGAGGCGCGAACGTCCGTGTCCTTCCGCCCGCAATCGTCATCGAACGAAGCTGGTCTGGCG
GTGTTCTATGACGAGCGACACTTCGCGACGCTCGCCGTGACCTTGGATGAGGACGGACGGCCAATTGTGCGCTTCCAGCG
GTCCGGCACTTCGGGCACCAGCGGCGAGGTCGCGGTTACTCCGGACGGCGAGATGCTGCTCCGCGTGATTGGAGACCTTG
ACGCATACGTGTTCTCGTGTTGGGACGAGCGCCAGGGAGACTGGCTCACGCTTGGCAAGGTACCCCGCGCGTGGTTCAGC
ACCGAGCACGCCGGCGGCTTTGTGGGCGTACACGTGGGCCTGTACGCGGTGGGTGCAGGGGAAGACGCCGCCGAAACCGC
CCTGTTTCCCTGGTTCGAGTACATCTCTGCCTCGGGTCAGGCACGGATGCCATCGTCACGCGCCGTGCTCGCTATCAGTT
AG

Protein sequence :
MSTFQNPVLTGMNPDPSLCAVGDEFFLVTSSFAYWPGIPVHRSRDLVHWEQIGHVLDRPEQIDLSGIDTSDGIWAPTIRH
HDGIFYVVSTVARDRRGGVNFVTTALDAAGPWMQPVVLDAEGIDPSLFFDDDGRCWFTACRDAEDPFLRGPAELYIQELD
LETLQLTGPLHVLWNGAVAGAWAEAPHIYKRDGVYYLIAAEGGTERNHSVTAARSATVTGPYRTDPRSPLLTHRHLGPEA
VFQNVGHADIVETPAGETWALVLATRPLDGAHTLGREVFLVPAEWTDDGLLLAPGFGHVREMERAPISMLSDAPTPDAPS
VERELFEGAGLPPGWRSLRGPVRGQEQACGAGVSLRASSDDLSDRGTPSFLARRQEHQSFEARTSVSFRPQSSSNEAGLA
VFYDERHFATLAVTLDEDGRPIVRFQRSGTSGTSGEVAVTPDGEMLLRVIGDLDAYVFSCWDERQGDWLTLGKVPRAWFS
TEHAGGFVGVHVGLYAVGAGEDAAETALFPWFEYISASGQARMPSSRAVLAIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0110 YP_001220849.1 xylosidase glycosyl hydrolase family protein Not tested chp/tomA region Protein 0.0 100