Gene Information

Name : trwL1 (BQ12490)
Accession : YP_032776.1
Strain : Bartonella quintana Toulouse
Genome accession: NC_005955
Putative virulence/resistance : Virulence
Product : conjugal transfer protein TrwL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1464361 - 1464678 bp
Length : 318 bp
Strand : +
Note : -

DNA sequence :
ATGAAACGATCAAATATGATTAAAATAGCGGTTCGTAATAGGATTACTGCAACTGTAACGGCTATGATTGTGTTTCTCAT
AACTCATCCTATATATACTCAAGCACAGGATTTGACGAGAGTAAAAACTGCTTTAGAGACATTCCGAGATCAATTGAAGA
CGATTATTCCTGTTGCTGCTGCCCTTATCCTTTTATGCTTAGCAATCGGTTATGCAGGACGATATATCGAAAAAGATACA
TTCATACGGTGGGCAATCGGCGTTGTCATCGCTGGTTCAGCAACCCAAATCGCCACTATATTGTTTAAAGCTGGATAA

Protein sequence :
MKRSNMIKIAVRNRITATVTAMIVFLITHPIYTQAQDLTRVKTALETFRDQLKTIIPVAAALILLCLAIGYAGRYIEKDT
FIRWAIGVVIAGSATQIATILFKAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwL5 CAD42840.1 TrwL5 protein Not tested trw-PAI Protein 4e-19 57
trwL5 YP_001610472.1 TrwL5 protein Virulence Not named Protein 5e-19 57
trwL3 CAD42838.1 TrwL3 protein Not tested trw-PAI Protein 1e-17 54
trwL3 YP_001610470.1 TrwL3 protein Virulence Not named Protein 2e-17 54
trwL4 YP_001610471.1 TrwL4 protein Virulence Not named Protein 4e-17 54
trwL4 CAD42839.1 TrwL4 protein Not tested trw-PAI Protein 3e-17 54
trwL6 YP_001610473.1 TrwL6 protein Virulence Not named Protein 1e-16 53
trwL6 CAD42841.1 TrwL6 protein Not tested trw-PAI Protein 8e-17 53
trwL2 CAD42837.1 TrwL2 protein Not tested trw-PAI Protein 3e-17 52
trwL2 YP_001610469.1 TrwL2 protein Virulence Not named Protein 4e-17 52
trwL1 CAD42836.1 TrwL1 protein Not tested trw-PAI Protein 1e-16 52
trwL1 YP_001610468.1 TrwL1 protein Virulence Not named Protein 1e-16 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
trwL1 YP_032776.1 conjugal transfer protein TrwL VFG2251 Protein 4e-17 63
trwL1 YP_032776.1 conjugal transfer protein TrwL VFG2253 Protein 3e-22 63
trwL1 YP_032776.1 conjugal transfer protein TrwL VFG2250 Protein 4e-21 60
trwL1 YP_032776.1 conjugal transfer protein TrwL VFG2252 Protein 7e-21 60
trwL1 YP_032776.1 conjugal transfer protein TrwL VFG2255 Protein 4e-14 57
trwL1 YP_032776.1 conjugal transfer protein TrwL VFG2256 Protein 1e-16 50
trwL1 YP_032776.1 conjugal transfer protein TrwL VFG2254 Protein 2e-14 48