Gene Information

Name : BYI23_D012550 (BYI23_D012550)
Accession : YP_005044288.1
Strain :
Genome accession: NC_016626
Putative virulence/resistance : Virulence
Product : succinatesemialdehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1430771 - 1432291 bp
Length : 1521 bp
Strand : +
Note : -

DNA sequence :
TTGACCACGAAGGACACTGACATGACGACGAGTTTTCATCCGGCGCTGGGTGAGGCGGCCCGCGACTTCCTTTCGCGCGA
ACACGGACTGCTGATCGACGGCCGCATGATTCCATCCGATGGCGGCAAGCGCACCGACATCCTCGATCCCGCGACGGGCG
ACGTGATTGCGACAGTCGCGGAAGCCACGGCCACCGATGTCGATCGCGCCGTCGAAGCCGCGCGCCGCGCATTGGAAGGG
CCGTGGCGCAAGGTCACGCCGTCGGAGCGCACGCGCATGATGCTGCGCTTCGCCGATCTGATCGAAACGCGCGGCGACGA
GCTCGCGCAACTCGAATGCGTCAACAGCGGCAAGCCGCTGCCGTTCTGCCGCAACGGCGACGTGCCGGGCATCGTCGAGA
TGCTGCGCTACATGGCCGGCTGGACGACGAAGATGGGCGGCGAAACGCCGAACGTATCGCTCGCGGGCGAATGGCACGCC
TACACGTTGCGCGAGCCGGTGGGCGTGGTCGGGCAGATCATCCCGTGGAATTTCCCGCTCAACATGGCGATGTGGAAGAT
CGCGCCCGCGCTCGCGGCGGGTTGCGCGGTCGTCATGAAGCCGTCGGAGCAGACGCCGCTCACGGCGCTCAGGCTCGGCG
AACTCGCGCTGGAAGCGGGCATTCCGCCCGGTGTGCTGAACATCGTGACGGGCTTCGGCAATCCTGTCGGCTCGGCGATC
GCCGCGCATCCGGGCATCGACAAGGTCGCGTTCACCGGGTCCGGCGAAACGGGGCGGCGCATCCTGCAGGCGGCGAGCGG
CAACCTCAAGCGCGTCTCGCTGGAACTGGGCGGCAAGTCGCCCGTGATCGTCTTTCCCGACGCGAACCTGGAAGCCGCCG
CGGCGGGCGTGTGCTCGTCGATCTTCTTTCATGCCGGGCAGATTTGCGCGGCGGGCTCGCGCCTCTATGTCCATGAACGC
GCCTACGAGCCGATGCTCGAACTCATCGCGAAGCGCGCCAACGGCATGAAGATGGGCCACGGCCTCGACGCCGGCACGGA
CATGGGTCCCGTCATCTCGCGCCGCCAGCTCGATCGCGTCGCGGGCTACATCCACAGCGGACAGGAAGAGGGCGCGACGC
TCTACGCGGGCGGCGGCTCGTCGGGCGAGCGCGGCTACTTCGTGCAGCCGACCGTGCTGACGGGCGTGAAACCCGGCATG
AAAGTCCACGACGAAGAAATCTTCGGGCCGGTGCTCTGCGCGATGTCCTTCGCCGACGACGACATCGACCGCATCGCCGC
GACCGCGAATGCATCGACCTACGGGCTCGCGGCGAGCATCTGGACGAAGGACCTCGGCCGCGCGCACAAGATGGCGCGTC
GCATGCAGGCGGGCATCGTCAACGTGAATGCGCTGTCGTCGCCCGACGCGACGCTGCCTTACGGCGGCTACAAGCAGTCG
GGCTGGGGCCGCGAGCGCGGCTTCGAGGCGATCGAGCTCTACACCGAAGTCAAGGCGGTCGCGATCAATCTGAACAACTG
A

Protein sequence :
MTTKDTDMTTSFHPALGEAARDFLSREHGLLIDGRMIPSDGGKRTDILDPATGDVIATVAEATATDVDRAVEAARRALEG
PWRKVTPSERTRMMLRFADLIETRGDELAQLECVNSGKPLPFCRNGDVPGIVEMLRYMAGWTTKMGGETPNVSLAGEWHA
YTLREPVGVVGQIIPWNFPLNMAMWKIAPALAAGCAVVMKPSEQTPLTALRLGELALEAGIPPGVLNIVTGFGNPVGSAI
AAHPGIDKVAFTGSGETGRRILQAASGNLKRVSLELGGKSPVIVFPDANLEAAAAGVCSSIFFHAGQICAAGSRLYVHER
AYEPMLELIAKRANGMKMGHGLDAGTDMGPVISRRQLDRVAGYIHSGQEEGATLYAGGGSSGERGYFVQPTVLTGVKPGM
KVHDEEIFGPVLCAMSFADDDIDRIAATANASTYGLAASIWTKDLGRAHKMARRMQAGIVNVNALSSPDATLPYGGYKQS
GWGRERGFEAIELYTEVKAVAINLNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-64 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-68 42
hpaE AAO17179.1 HpaE Not tested tcd island Protein 8e-63 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-68 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-68 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-68 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-68 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BYI23_D012550 YP_005044288.1 succinatesemialdehyde dehydrogenase VFG0082 Protein 1e-68 42