Gene Information

Name : TY21A_06535 (TY21A_06535)
Accession : YP_007925611.1
Strain : Salmonella enterica Ty21a
Genome accession: NC_021176
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1352114 - 1353082 bp
Length : 969 bp
Strand : +
Note : COG1886 Flagellar motor switch/type III secretory pathway protein

DNA sequence :
ATGTTAAGAATAGCGAATGAAGAGCGTCCGTGGGTGGAGATACTTCCAACACAAGGCGCTACCATTGGTGAGCTGACATT
GAGTATGCAACAATATCCAGTACAGCAAGGGACATTATTTACCATAAATTATCATAATGAGCTGGGTAGGGTGTGGATTG
CAGAACAATGCTGGCAGCGCTGGTGTGAAGGGCTAATTGGCACCGCTAATCGATCGGCTATTGAGCCTGAATTGCTATAT
GGAATAGCTGAATGGGGGCTGGCGCCGTTATTGCAAGCCAGTGATGCAACCCTCTGTCAGAACGAGCCGCCAACATCCTG
CAGTAATCTACCACATCAGCTAGCGTTGCATATTAAATGGACAGTTGAAGAACATGAGTTCCATAGCATTATTTTTACAT
GGCCAACGGGTTTTTTGCGCAATATAGTCGGAGAGCTTTCTGCTGAGCGTCAACAGATTTATCCTGCTCCTCCTGTGGTA
GTCCCTGTATATTTAGGCTGGTGTCAGCTTACATTAATTGAACTTGAGTCTATCGAAATCGGCATGGGCGTTCGGATTCA
TTGCTTTGGCGACATCAGACTCGGTTTTTTTGCTATTCAACTACCTGGGGGTATTTACGCGAGGGTGTTGCTGACAGAGG
ATAACACGATGAAATTTGACGAATTAGTCCAGGATATCGAAACGCTACTTGCGTCAGGGAGCCCGATGTTAAAGAGTGAT
GGAACGTCTTCAGTCGAACTTGAGCAGATACCACAACAGGTGCTCTTTGAGATTGGACGTGCGAGTCTGGAAATTGGACA
ATTACGACAACTTAAAACGGGGGACGTTTTGCCTGTAGGCGGATGTTTTGCGCCAGAAGTGACGATAAGAGTAAATGACC
GTATTATTGGGCAAGGTGAGTTGATTGCCTGTGGGAATGAATTCATGGTACGTATTACACGTTGGTATCTTTGCAAAAAT
ACAGCGTAA

Protein sequence :
MLRIANEERPWVEILPTQGATIGELTLSMQQYPVQQGTLFTINYHNELGRVWIAEQCWQRWCEGLIGTANRSAIEPELLY
GIAEWGLAPLLQASDATLCQNEPPTSCSNLPHQLALHIKWTVEEHEFHSIIFTWPTGFLRNIVGELSAERQQIYPAPPVV
VPVYLGWCQLTLIELESIEIGMGVRIHCFGDIRLGFFAIQLPGGIYARVLLTEDNTMKFDELVQDIETLLASGSPMLKSD
GTSSVELEQIPQQVLFEIGRASLEIGQLRQLKTGDVLPVGGCFAPEVTIRVNDRIIGQGELIACGNEFMVRITRWYLCKN
TA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaQ NP_456110.1 putative type III secretion protein Virulence SPI-2 Protein 2e-143 100
ssaQ NP_805089.1 type III secretion system protein Virulence SPI-2 Protein 2e-143 100
ssaQ NP_460383.1 type III secretion system protein Virulence SPI-2 Protein 3e-142 99
ssaQ YP_216426.1 type III secretion system protein Virulence SPI-2 Protein 6e-143 99
ssaQ CAA70540.1 secretion system apparatus Virulence SPI-2 Protein 5e-98 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TY21A_06535 YP_007925611.1 type III secretion system protein VFG0518 Protein 1e-142 99