Gene Information

Name : ykoG (BPUM_1219)
Accession : YP_001486463.1
Strain : Bacillus pumilus SAFR-032
Genome accession: NC_009848
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1283671 - 1284357 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGAACAAAGGGAAGATACTCGTAGTCGAAGATGAAAAGAAAATTGCAAGGGTGCTGTCACTAGAGCTTCAGTATGAAGG
GTATGAGGTGACGGTCAAAGAGACAGGAATAGATGGACTTCAGGCTTTAGAAGAAGAAAGCTTCGATTTGGTGCTGCTTG
ATGTTATGCTTCCAGAATTAAGCGGTCTTGAAGTGCTGAGAAGAGTTCGTAAGACAAATACGGCGACACCTATTATGTTG
ATTACAGCAAGAGATAGTGTGCCTGATAAGGTAAGTGGGCTTGATCTTGGAGCGAATGATTATATTACAAAGCCTTTTGA
CATAGAAGAATTATTAGCGCGAATTCGTGCGCAACTCAGATTGAATATAAACGAGCAACAAGAGAAGGAGACAGAGCTGA
GCATAGCAGATTTAACTGTCAACGAGAAAACAAGAGACATACAAAGGGCAGGTCAAATGCTTGAACTCACGCCGAGAGAA
TATGACCTGCTTGTCCACTTGCTGAAACATCAGCAGCAAGTGCTCACAAGAGATCAGCTTTTAACAGCTGTTTGGGGTTT
TGATTATTTTGGCGATACGAACGTGGTGGATGTCTATATCCGTTATTTAAGGAAAAAAGTCGATTACCCATTCGAAAAAC
AACTGATTCACACAGTGAGAGGTGTGGGTTATGTGATGAAAGGATAA

Protein sequence : 
MNKGKILVVEDEKKIARVLSLELQYEGYEVTVKETGIDGLQALEEESFDLVLLDVMLPELSGLEVLRRVRKTNTATPIML
ITARDSVPDKVSGLDLGANDYITKPFDIEELLARIRAQLRLNINEQQEKETELSIADLTVNEKTRDIQRAGQMLELTPRE
YDLLVHLLKHQQQVLTRDQLLTAVWGFDYFGDTNVVDVYIRYLRKKVDYPFEKQLIHTVRGVGYVMKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-36 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ykoG YP_001486463.1 response regulator HE999704.1.gene1528. Protein 1e-44 54
ykoG YP_001486463.1 response regulator NC_002952.2859858.p0 Protein 4e-41 48
ykoG YP_001486463.1 response regulator NC_007622.3794948.p0 Protein 4e-41 48
ykoG YP_001486463.1 response regulator NC_003923.1003417.p0 Protein 4e-41 48
ykoG YP_001486463.1 response regulator AE015929.1.gene1106. Protein 1e-37 48
ykoG YP_001486463.1 response regulator NC_013450.8614146.p0 Protein 4e-41 48
ykoG YP_001486463.1 response regulator NC_002951.3238224.p0 Protein 4e-41 48
ykoG YP_001486463.1 response regulator NC_007793.3914065.p0 Protein 4e-41 48
ykoG YP_001486463.1 response regulator NC_002758.1121390.p0 Protein 4e-41 48
ykoG YP_001486463.1 response regulator NC_010079.5776364.p0 Protein 4e-41 48
ykoG YP_001486463.1 response regulator BAC0125 Protein 6e-39 46
ykoG YP_001486463.1 response regulator NC_012469.1.7685629. Protein 3e-38 46
ykoG YP_001486463.1 response regulator BAC0308 Protein 5e-38 46
ykoG YP_001486463.1 response regulator BAC0197 Protein 3e-38 45
ykoG YP_001486463.1 response regulator AE000516.2.gene3505. Protein 2e-29 44
ykoG YP_001486463.1 response regulator BAC0083 Protein 3e-38 43
ykoG YP_001486463.1 response regulator BAC0638 Protein 6e-36 43
ykoG YP_001486463.1 response regulator NC_012469.1.7686381. Protein 4e-35 42
ykoG YP_001486463.1 response regulator NC_002952.2859905.p0 Protein 1e-36 42
ykoG YP_001486463.1 response regulator NC_013450.8614421.p0 Protein 1e-36 42
ykoG YP_001486463.1 response regulator NC_007793.3914279.p0 Protein 1e-36 42
ykoG YP_001486463.1 response regulator NC_003923.1003749.p0 Protein 2e-36 42
ykoG YP_001486463.1 response regulator NC_007622.3794472.p0 Protein 1e-36 42
ykoG YP_001486463.1 response regulator NC_002745.1124361.p0 Protein 1e-36 42
ykoG YP_001486463.1 response regulator NC_009782.5559369.p0 Protein 1e-36 42
ykoG YP_001486463.1 response regulator NC_002951.3237708.p0 Protein 1e-36 42
ykoG YP_001486463.1 response regulator NC_002758.1121668.p0 Protein 1e-36 42
ykoG YP_001486463.1 response regulator NC_009641.5332272.p0 Protein 1e-36 42
ykoG YP_001486463.1 response regulator BAC0111 Protein 5e-37 41
ykoG YP_001486463.1 response regulator HE999704.1.gene2815. Protein 7e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ykoG YP_001486463.1 response regulator VFG1390 Protein 1e-44 44
ykoG YP_001486463.1 response regulator VFG0596 Protein 3e-36 43
ykoG YP_001486463.1 response regulator VFG1386 Protein 5e-43 42