Gene Information

Name : YE105_C1210 (YE105_C1210)
Accession : YP_004297409.1
Strain : Yersinia enterocolitica 105.5R(r)
Genome accession: NC_015224
Putative virulence/resistance : Virulence
Product : transcriptional activator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1439363 - 1440037 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
GTGGAAGATGAAGAAAAAACCTCGTCCTATTTAAGTCGGGCGTTAGGGGAATCGGGCTTTAGCGTGGATATATCTGCTAA
TGGTGCAGAGGGGCTGCATTATGCGCTGGAATATGATTACGATGCCATAATCCTTGATGTCATGTTGCCCGGCATGGATG
GCTATCGGGTGCTGGAGGGTATTCGCGCCAGTAAACAAACGCCGGTGTTGATGCTTTCAGCTCGAGGCTCGGTGGATGAG
CGCGTCAAAGGCCTGCGTCTTGATGCCGATGATTATCTGCCTAAACCCTTCTCACTCATTGAGTTGGTCGCCCGCATTCA
AGCGCTAGTGCGTCGTCGCTCGACGGATGGCGCAGATATCACGCAACTACAGATTCATGACCTACATCTGGATCTGCTGG
CTCGTCGCGTATTTCGAACTGGAACCCGGCTGGAACTGACCGCGAAAGAGTTTTCCTTGCTCAGTCTGCTGGCGCGTCAC
CAGGGAGAAATCCTGTCAAAAATGATGATCGCCGAGCAAGTCTGGGATATGAATTTCGACAGCGATGCCAACGTGGTTGA
GGTTGCGATTAAACGTCTGCGCGACAAGATTGATGCGCCATTTGAGGTCAAGTTACTGCATACCGTGCGCGGTATGGGCT
ATGTTCTTGAAGTCAGGCCAGACACACTAAGTTAA

Protein sequence : 
MEDEEKTSSYLSRALGESGFSVDISANGAEGLHYALEYDYDAIILDVMLPGMDGYRVLEGIRASKQTPVLMLSARGSVDE
RVKGLRLDADDYLPKPFSLIELVARIQALVRRRSTDGADITQLQIHDLHLDLLARRVFRTGTRLELTAKEFSLLSLLARH
QGEILSKMMIAEQVWDMNFDSDANVVEVAIKRLRDKIDAPFEVKLLHTVRGMGYVLEVRPDTLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-47 50
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-46 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C1210 YP_004297409.1 transcriptional activator BAC0083 Protein 3e-54 60
YE105_C1210 YP_004297409.1 transcriptional activator BAC0125 Protein 8e-57 59
YE105_C1210 YP_004297409.1 transcriptional activator BAC0197 Protein 9e-53 57
YE105_C1210 YP_004297409.1 transcriptional activator BAC0638 Protein 2e-49 57
YE105_C1210 YP_004297409.1 transcriptional activator BAC0111 Protein 1e-52 54
YE105_C1210 YP_004297409.1 transcriptional activator BAC0347 Protein 5e-45 50
YE105_C1210 YP_004297409.1 transcriptional activator BAC0308 Protein 8e-50 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YE105_C1210 YP_004297409.1 transcriptional activator VFG0596 Protein 1e-47 50
YE105_C1210 YP_004297409.1 transcriptional activator VFG1389 Protein 5e-36 46
YE105_C1210 YP_004297409.1 transcriptional activator VFG1390 Protein 6e-33 43
YE105_C1210 YP_004297409.1 transcriptional activator VFG1386 Protein 2e-32 43