Gene Information

Name : Hbal_1278 (Hbal_1278)
Accession : YP_003059667.1
Strain : Hirschia baltica ATCC 59814
Genome accession: NC_012982
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1341623 - 1342294 bp
Length : 672 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pzu:PHZ_c2688 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain)

DNA sequence :
TTGCGCGTACTCGTCATTGAAGATGATATAGAAGCAGCGGATTTCGTCAGAAAAGTGCTCAGCGAAGCTGGGCACGACGT
TGCCGTTGAGAATGATGGCGAGGCTGGTCTCAGTCGTGCTCAGTCTGATGAATTCGATGCTATGGTTGTTGATCGTATGA
TGCCAAAGATGAATGGTATCGAGATGTTAACAACCTATCGTGATACGGGTGGTAACACACCGGCATTGTTTCTGACGGCT
CTAGGTGATGTTGAAAATCGCGTCGAAGGTCTAAAAGCTGGTGGCGATGATTATCTGTGTAAGCCTTTTGCGCCGAGTGA
ATTAATTGCGCGTGTTGAAGCACTTGGAAGACGCGCTTCTAGTGAAGCTCCTACGACAAAATTACAAGTAGGGGATCTTG
TCATGGATCTCCTAGCACGCACTGTTTTTAGAGGTGAGGTCAAAATAGACCTTCAGCCGCGTGAGTTCCGTTTGTTGGAA
TTTCTTATGAGAAATGCCGATCAAGTGGTTACAAGAACAATGCTGCTTGAGAAAGTCTGGGATTATCATTTTGATCCGCA
GACAAATGTGATTGATGTGCATATTTCCCGTTTGCGCAGCAAGATTGATAAGGACTTTGAAGTTGCGCTTTTGCACACAG
TGCGTGGTGCAGGGTATAGACTTCAGGCCTAG

Protein sequence :
MRVLVIEDDIEAADFVRKVLSEAGHDVAVENDGEAGLSRAQSDEFDAMVVDRMMPKMNGIEMLTTYRDTGGNTPALFLTA
LGDVENRVEGLKAGGDDYLCKPFAPSELIARVEALGRRASSEAPTTKLQVGDLVMDLLARTVFRGEVKIDLQPREFRLLE
FLMRNADQVVTRTMLLEKVWDYHFDPQTNVIDVHISRLRSKIDKDFEVALLHTVRGAGYRLQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-35 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hbal_1278 YP_003059667.1 transcriptional regulator BAC0083 Protein 4e-48 48
Hbal_1278 YP_003059667.1 transcriptional regulator BAC0638 Protein 7e-42 47
Hbal_1278 YP_003059667.1 transcriptional regulator BAC0125 Protein 2e-47 46
Hbal_1278 YP_003059667.1 transcriptional regulator BAC0111 Protein 2e-48 44
Hbal_1278 YP_003059667.1 transcriptional regulator BAC0347 Protein 1e-44 43
Hbal_1278 YP_003059667.1 transcriptional regulator BAC0308 Protein 4e-44 43
Hbal_1278 YP_003059667.1 transcriptional regulator BAC0197 Protein 1e-39 43
Hbal_1278 YP_003059667.1 transcriptional regulator HE999704.1.gene1528. Protein 8e-30 42
Hbal_1278 YP_003059667.1 transcriptional regulator AE000516.2.gene3505. Protein 3e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hbal_1278 YP_003059667.1 transcriptional regulator VFG1390 Protein 3e-39 44
Hbal_1278 YP_003059667.1 transcriptional regulator VFG0596 Protein 4e-36 43
Hbal_1278 YP_003059667.1 transcriptional regulator VFG1389 Protein 8e-33 41