Gene Information

Name : METDI1372 (METDI1372)
Accession : YP_003066976.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Unknown
Product : tartrate transporter ttuB
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2223
EC number : -
Position : 1246677 - 1248020 bp
Length : 1344 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of amino acid motif, structural feature or limited homology; PubMedId : 7592429; Product type pt : transporter

DNA sequence :
TTGGCACACAGAGACCAACGCATGCTTGCTTACCAGGAGGAAACGATGGACGCCGCGCTCGAGCGGGCAACCATGCGCAA
GGTCGCATGGCGCCTGGTTCCATTTATCTGCCTTCTCTACTTCATCGCCTTCATCGATCGCGTGAACATTGGCTTTGCCG
CGCTGACGATGAACAAGGATCTCGGCTTCTCATCGGCGGTATTCGGCTTCGGCGCCGGCATCTTCTTCTTCGGATATTTC
CTGTTCGAGGTGCCCTCGAACATCATCCTCGACAAAGTCGGTGCCAGGATCTGGATCGCGCGGGTGATGATCACCTGGGG
GATCATCTCGGGAGCCTTCGCCTTCGTGCAAGGCGAGTACAGCTTCTACACGCTGCGCTTCCTGCTCGGTGCGGCCGAGG
CCGGCTTCTTCCCCGGCATTATCCTCTACTTGAGCTACTGGTTCCCGGCCCGGTACCGGGCCGGAGTCGTCTCGCTGTTC
ATGGCGGCGGCGCCGATCTCGGTGGTGCTCGGCTCACCGATCTCCAGCGCCCTGCTCGGGATGGAAGGCGTCCTGGGCCT
TCATGGCTGGCAATGGATGTTCCTTATCGAGGCCGCGCCCGCCGTGGTGCTCGGCGTGGTCGTGCTTTTCTACATGACCG
ACCGCCCCGAGAAGGCGCGGTGGCTCTCCGACGAGCAGCGCGCCTGGCTCGTCGCGGAGATGAACGAGGAGCATGCCCGC
AAGCAGGTCAGCGCCAAGCACGGCATCCTGGCCGGGATGGCCGATCCCCGCGTGCTGGCGCTGGCGCTCATCTATTTTGG
CACCTCGGCGGGGCTCTACACCCTCGGCATCTGGGCGCCGCAGATCATCAAGAGCTTCGGCCTGTCCACCATGGCGGTCG
GCTTTCTCAACGGCGTGCCGCCGACCATCGCGATCATCGCGATGATCCTGTGGGCCCGCCATTCCGACCGGACGGGCGAG
CGCACCTGGCACGTGGTCATCGCCTGCCTCGTCGCCTCCGTCGGCCTGATGCTAGCTGGCGGTGCATCCTCGGCCGTCGC
GGTCATCGCCGCGCTCAGCCTCGTCAACGTCGGCATCAGTGCGGCCAAGCCGCCGCTCTGGGCCATGCCGACAATGTTCC
TGTCGGGCTCGGCGGCGGCTGTCGGCATTGCCACGATCAACTCGATCGGCAATCTCGGCGGCTTCGTCGGTCCCTGGGCG
ATCGGCTGGATCAAGGATCAGACCGGCAGCTTCACCGGCGGCCTGATCTTCGTCGCCGGGCTGCTGATCTTTTCTGCGGT
CGTCACCCTCATCGTCGCCCGAACCGGGCAGCGTCCTGAGCCGGCCGGCGCCGTCGCGCGCTGA

Protein sequence :
MAHRDQRMLAYQEETMDAALERATMRKVAWRLVPFICLLYFIAFIDRVNIGFAALTMNKDLGFSSAVFGFGAGIFFFGYF
LFEVPSNIILDKVGARIWIARVMITWGIISGAFAFVQGEYSFYTLRFLLGAAEAGFFPGIILYLSYWFPARYRAGVVSLF
MAAAPISVVLGSPISSALLGMEGVLGLHGWQWMFLIEAAPAVVLGVVVLFYMTDRPEKARWLSDEQRAWLVAEMNEEHAR
KQVSAKHGILAGMADPRVLALALIYFGTSAGLYTLGIWAPQIIKSFGLSTMAVGFLNGVPPTIAIIAMILWARHSDRTGE
RTWHVVIACLVASVGLMLAGGASSAVAVIAALSLVNVGISAAKPPLWAMPTMFLSGSAAAVGIATINSIGNLGGFVGPWA
IGWIKDQTGSFTGGLIFVAGLLIFSAVVTLIVARTGQRPEPAGAVAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96228.1 major facilitator family transporter Not tested T-PAI Protein 8e-62 46
unnamed AAT96116.1 major facilitator family transporter Not tested T-PAI Protein 3e-62 46
unnamed AAT96055.1 major facilitator family transporter Not tested T-PAI Protein 8e-62 46
unnamed AAT96099.1 major facilitator family transporter Not tested T-PAI Protein 8e-62 46
unnamed AAT96176.1 major facilitator family transporter Not tested T-PAI Protein 8e-62 46
hpaX AAO17186.1 HpaX Not tested tcd island Protein 1e-62 44